Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HB4
Gene Symbol Synonym OSHB4, OsHox32, HOX32, OsHB4, Oshox32, PHB3, OsHDZ13, OsHDZIP13, HDZ13, HDZIP13
Gene Name Synonym Homeobox-leucine zipper protein HOX32, Homeodomain transcription factor HOX32, HD-ZIP protein HOX32, rice homeobox gene 32, homeodomain-leucine zipper transcription factor 13, OsHDZIP transcription factor 13
Chromosome No. 3
Explanation A2XK30(indica), Q6AST1(japonica). EF555551. closely related to Arabidopsis PHB. orthologous to both Arabidopsis PHB and PHV. START domain protein (Steroidogenic acute regulatory protein-related lipid transfer domain protein, StAR-related lipid transfer domain protein). GO:2000024: regulation of leaf development. TO:0006064: rolled leaf. TO:0006059: cadmium content trait. a major target of miR166. HB3 in Liu et al. 2019. GO:1904583: response to polyamine macromolecule.
Trait Class Tolerance and resistance - Stress tolerance
Reproductive organ - Spikelet, flower, glume, awn
Vegetative organ - Leaf
Vegetative organ - Culm
Coloration - Chlorophyll
cDNA Accession No. AK103284
MSU ID LOC_Os03g43930.1
RAP ID Os03g0640800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Mahtha S.K., Kumari K., Gaur V., Yadav G.
Comput Struct Biotechnol J 2023  21  3946-3963
Cavity architecture based modulation of ligand binding tunnels in plant START domains.
Ahmad S., Chen Y., Shah A.Z., Wang H., Xi C., Zhu H., Ge L.
Bioengineering (Basel) 2022  9(8) 
The Homeodomain-Leucine Zipper Genes Family Regulates the Jinggangmycin Mediated Immune Response of <i>Oryza sativa</i> to <i>Nilaparvata lugens</i>, and <i>Laodelphax striatellus</i>.
Chen H., Fang R., Deng R., Li J.
Plant Biotechnol. J. 2021   
The OsmiRNA166b-OsHox32 pair regulates mechanical strength of rice plants by modulating cell wall biosynthesis.
Liu S., Fu H., Jiang J., Chen Z., Gao J., Shu H., Zhang S., Yang C., Liu J.
Front Plant Sci 2019  10  848
Overexpression of a CPYC-Type Glutaredoxin, <i>OsGrxC2.2</i>, Causes Abnormal Embryos and an Increased grain weight in Rice.
Miyamoto M., Shimao S., Tong W., Motose H., Takahashi T.
Plants (Basel) 2019  8(8) 
Effect of Thermospermine on the Growth and Expression of Polyamine-Related Genes in Rice Seedlings.
Ding Y., Gong S., Wang Y., Wang F., Bao H., Sun J., Cai C., Yi K., Chen Z., Zhu C.
Plant Physiol. 2018  177(4)  1691-1703
MicroRNA166 Modulates Cadmium Tolerance and Accumulation in Rice.
Zhang J., Zhang H., Srivastava A.K., Pan Y., Bai J., Fang J., Shi H., Zhu J.K.
Plant Physiol. 2018  176(3)  2082-2094
Knockdown of Rice MicroRNA166 Confers Drought Resistance by Causing leaf rolling and Altering Stem Xylem Development.
Xu P., Ali A., Han B., Wu X.
Front Plant Sci 2018  9  1528
Current Advances in Molecular Basis and Mechanisms Regulating Leaf Morphology in Rice.
Li Y.Y., Shen A., Xiong W., Sun Q.L., Luo Q., Song T., Li Z.L., Luan W.J.
Rice (N Y) 2016  9(1)  46
Overexpression of OsHox32 Results in Pleiotropic Effects on Plant Type Architecture and Leaf Development in Rice.
Khanday I., Yadav S.R., Vijayraghavan U.
Plant Physiol. 2013  161(4)  1970-83
Rice LHS1/OsMADS1 Controls Floret Meristem Specification by Coordinated Regulation of Transcription Factors and Hormone Signaling Pathways.
Toriba T., Suzaki T., Yamaguchi T., Ohmori Y., Tsukaya H., Hiro-Yuki Hirano
Plant Cell 2010  22(5)  1452-62
Distinct regulation of adaxial-abaxial polarity in anther patterning in rice.
Agalou,A., Purwantomo,S., Overnas,E., Johannesson,H., Zhu,X., Estiati,A., de Kam,R.J., Engstrom,P., Slamet-Loedin,I.H., Zhu,Z., Wang,M., Xiong,L., Meijer,A.H. and Ouwerkerk,P.B.
Plant Mol. Biol. 2008  66(1-2)  87-103
A genome-wide survey of HD-Zip genes in rice and analysis of drought-responsive family members
Itoh J,Hibara K,Sato Y,Nagato Y
Plant Physiol. 2008  147  1960-75
Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice.
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DB Reference
Gramene ID -
Gene Ontology plasma membrane( GO:0005886 )
cell wall biogenesis( GO:0042546 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
sequence-specific DNA binding( GO:0043565 )
response to light stimulus( GO:0009416 )
leaf development( GO:0048366 )
response to jasmonic acid stimulus( GO:0009753 )
response to abscisic acid stimulus( GO:0009737 )
response to cadmium ion( GO:0046686 )
response to auxin stimulus( GO:0009733 )
response to water deprivation( GO:0009414 )
Trait Ontology leaf development trait( TO:0000655 )
leaf width( TO:0000370 )
leaf angle( TO:0000206 )
plant height( TO:0000207 )
chlorophyll content( TO:0000495 )
water use efficiency( TO:0001017 )
light sensitivity( TO:0000075 )
leaf rolling( TO:0000085 )
drought tolerance( TO:0000276 )
photosynthetic rate( TO:0001015 )
jasmonic acid sensitivity( TO:0000172 )
abscisic acid sensitivity( TO:0000615 )
auxin sensitivity( TO:0000163 )
stem strength( TO:0000051 )
Plant Ontology leaf development stage( PO:0001050 )
leaf( PO:0025034 )
root( PO:0009005 )
inflorescence( PO:0009049 )
endosperm( PO:0009089 )
Related Strains
Phenotype images
Last updated
Nov 29, 2023