Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HOX9
Gene Symbol Synonym Oshox9, OsHox9, OsHB2, HB2, OSHB2, OsHDZ37, OsHDZIP37, HDZ37, HDZIP37
CGSNL Gene Name HOMEOBOX GENE 9
Gene Name Synonym rice homeobox gene 9, Homeobox-leucine zipper protein HOX9, Homeodomain transcription factor HOX9, HD-ZIP protein HOX9, HOMEODOMAIN CONTAINING PROTEIN 2, homeodomain-leucine zipper transcription factor 37, OsHDZIP transcription factor 37
Protein Name HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX9
Allele
Chromosome No. 10
Explanation EF555530. Q9AV49(japonica), A2Z8L4(indica). leucin zipper gene family. START domain protein (Steroidogenic acute regulatory protein-related lipid transfer domain protein, StAR-related lipid transfer domain protein). PO:0030123: panicle inflorescence. GO:0060992: response to fungicide.
Trait Class Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. AK102603
MSU ID LOC_Os10g33960.1
LOC_Os10g33960.2
LOC_Os10g33960.3
LOC_Os10g33960.4
RAP ID Os10g0480200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Mahtha S.K., Kumari K., Gaur V., Yadav G.
Comput Struct Biotechnol J 2023  21  3946-3963
Cavity architecture based modulation of ligand binding tunnels in plant START domains.
Ahmad S., Chen Y., Shah A.Z., Wang H., Xi C., Zhu H., Ge L.
Bioengineering (Basel) 2022  9(8) 
The Homeodomain-Leucine Zipper Genes Family Regulates the Jinggangmycin Mediated Immune Response of <i>Oryza sativa</i> to <i>Nilaparvata lugens</i>, and <i>Laodelphax striatellus</i>.
Li Y., Yang Y., Liu Y., Li D., Zhao Y., Li Z., Liu Y., Jiang D., Li J., Zhou H., Chen J., Zhuang C., Liu Z.
Rice (N Y) 2019  12(1)  60
Overexpression of OsAGO1b Induces Adaxially Rolled Leaves by Affecting Leaf Abaxial Sclerenchymatous Cell Development in Rice.
Agalou,A., Purwantomo,S., Overnas,E., Johannesson,H., Zhu,X., Estiati,A., de Kam,R.J., Engstrom,P., Slamet-Loedin,I.H., Zhu,Z., Wang,M., Xiong,L., Meijer,A.H. and Ouwerkerk,P.B.
Plant Mol. Biol. 2008  66(1-2)  87-103
A genome-wide survey of HD-Zip genes in rice and analysis of drought-responsive family members
Itoh J,Hibara K,Sato Y,Nagato Y
Plant Physiol. 2008  147  1960-75
Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice.
Nagasaki H, Itoh J, Hayashi K, Hibara K, Satoh-Nagasawa N, Nosaka M, Mukouhata M, Ashikari M, Kitano H, Matsuoka M, Nagato Y, Sato Y.
Proc. Natl. Acad. Sci. U.S.A. 2007  104(37)  14867-71
The small interfering RNA production pathway is required for shoot meristem initiation in rice.
TextPresso Search Search textpresso for HOX9 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology defense response to insect( GO:0002213 )
cytoplasm( GO:0005737 )
response to salt stress( GO:0009651 )
response to jasmonic acid stimulus( GO:0009753 )
DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
sequence-specific DNA binding( GO:0043565 )
Trait Ontology salt tolerance( TO:0006001 )
jasmonic acid sensitivity( TO:0000172 )
brown planthopper resistance( TO:0000424 )
insect damage resistance( TO:0000261 )
Plant Ontology root( PO:0009005 )
stem( PO:0009047 )
leaf( PO:0025034 )
inflorescence( PO:0009049 )
carpel( PO:0009030 )
endosperm( PO:0009089 )
Related Strains
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Phenotype images
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Last updated
Nov 29, 2023


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