Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
|---|---|
| CGSNL Gene Symbol | LF1 |
| Gene Symbol Synonym | HOX10, Oshox10, OsHox10, OsHB1, HB1, OSHB1, LF1/OsHB1, OsLF1 |
| CGSNL Gene Name | LATERAL FLORET 1 |
| Gene Name Synonym | rice homeobox gene 10, Homeobox-leucine zipper protein HOX10, Homeodomain transcription factor HOX10, HD-ZIP protein HOX10, HOMEODOMAIN CONTAINING PROTEIN 1, Homeodomain transcription factor HOX10, lateral florets 1 |
| Protein Name | HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX10 |
| Allele | lf1 |
| Chromosome No. | 3 |
| Explanation | EF555531. A2XBL9 (indica), Q6TAQ6 (japonica). leucin zipper gene family. GO:0090708: specification of plant organ axis polarity. PO:0099402: plant organ development. TO:0020106: Indole-3-acetic acid content. PO:0030123: panicle inflorescence. TO:0006064: rolled leaf. TO:1000023: lemma morphology trait. |
| Trait Class |
Vegetative organ - Leaf
Reproductive organ - Spikelet, flower, glume, awn Other |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK102378
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| MSU ID |
LOC_Os03g01890.1
LOC_Os03g01890.2 |
| RAP ID |
Os03g0109400 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Zhang T., You J., Zhang Y., Yao W., Chen W., Duan Q., Xiao W., Ye L., Zhou Y., Sang X., Ling Y., He G., Li Y.
New Phytol. 2021 lf1 regulates the lateral organs polarity development in rice.
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Li Y., Yang Y., Liu Y., Li D., Zhao Y., Li Z., Liu Y., Jiang D., Li J., Zhou H., Chen J., Zhuang C., Liu Z.
Rice (N Y) 2019 12(1) 60 Overexpression of OsAGO1b Induces Adaxially Rolled Leaves by Affecting Leaf Abaxial Sclerenchymatous Cell Development in Rice.
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Zhang T., Li Y., Ma L., Sang X., Ling Y., Wang Y., Yu P., Zhuang H., Huang J., Wang N., Zhao F., Zhang C., Yang Z., Fang L., He G.
Proc. Natl. Acad. Sci. U.S.A. 2017 LATERAL FLORET 1 induced the three-florets spikelet in rice.
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Agalou,A., Purwantomo,S., Overnas,E., Johannesson,H., Zhu,X., Estiati,A., de Kam,R.J., Engstrom,P., Slamet-Loedin,I.H., Zhu,Z., Wang,M., Xiong,L., Meijer,A.H. and Ouwerkerk,P.B.
Plant Mol. Biol. 2008 66(1-2) 87-103 A genome-wide survey of HD-Zip genes in rice and analysis of drought-responsive family members
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Itoh J,Hibara K,Sato Y,Nagato Y
Plant Physiol. 2008 147 1960-75 Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice.
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Nagasaki H, Itoh J, Hayashi K, Hibara K, Satoh-Nagasawa N, Nosaka M, Mukouhata M, Ashikari M, Kitano H, Matsuoka M, Nagato Y, Sato Y.
Proc. Natl. Acad. Sci. U.S.A. 2007 104(37) 14867-71 The small interfering RNA production pathway is required for shoot meristem initiation in rice.
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| TextPresso Search | Search textpresso for LF1 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
leaf development( GO:0048366 )
cell fate specification( GO:0001708 ) adaxial/abaxial pattern formation( GO:0009955 ) transcription factor activity( GO:0003700 ) nucleus( GO:0005634 ) transcription( GO:0006350 ) sequence-specific DNA binding( GO:0043565 ) regulation of transcription, DNA-dependent( GO:0006355 ) floral meristem determinacy( GO:0010582 ) flower development( GO:0009908 ) |
| Trait Ontology |
spikelet anatomy and morphology trait( TO:0000657 )
auxin content( TO:0002672 ) leaf width( TO:0000370 ) leaf development trait( TO:0000655 ) lemma shape( TO:0000614 ) |
| Plant Ontology |
root( PO:0009005 )
stem( PO:0009047 ) leaf( PO:0025034 ) leaf sheath( PO:0020104 ) inflorescence( PO:0009049 ) vascular leaf primordium( PO:0000017 ) shoot apical meristem( PO:0020148 ) bundle sheath extension( PO:0006022 ) xylem( PO:0005352 ) lemma( PO:0009037 ) leaf development stage( PO:0001050 ) |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Jan 13, 2022 | |
