Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol NRAMP4
Gene Symbol Synonym OsNRAMP4, Nrat1, Nramp6, OsNRAT1, FCO5
CGSNL Gene Name NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 4
Gene Name Synonym BACTERIOCIDE EFFECT 4, Nramp aluminum transporter 1, Functioning in Cesium Over-transport 5
Protein Name NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 4
Allele NRAT1.1, NRAT1.2, NRAT1.3
Chromosome No. 2
Explanation Q6ZG85. OsNRAT1 in Li et al. 2014, Zhu et al. 2019. GO:1904880: response to hydrogen sulfide. GO:1904585: response to putrescine. TO:0000995: aluminum content trait.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK102180
MSU ID LOC_Os02g03900.1
RAP ID Os02g0131800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Zhu C.Q., Cao X.C., Bai Z.G., Zhu L.F., Hu W.J., Hu A.Y., Abliz B., Zhong C., Liang Q.D., Huang J., Zhang J.H., Jin Q.Y.
Physiol Plant 2019   
Putrescine alleviates aluminum toxicity in rice (Oryza sativa) by reducing cell wall Al contents in an ethylene-dependent manner.
Zhu C.Q., Zhang J.H., Sun L.M., Zhu L.F., Abliz B., Hu W.J., Zhong C., Bai Z.G., Sajid H., Cao X.C., Jin Q.Y.
Front Plant Sci 2018  9  294
Hydrogen Sulfide Alleviates Aluminum Toxicity via Decreasing Apoplast and Symplast Al Contents in Rice.
Mani A., Sankaranarayanan K.
Protein J. 2018  37(3)  237-247
In Silico Analysis of Natural Resistance-Associated Macrophage Protein (NRAMP) Family of Transporters in Rice.
Yamaki T., Otani M., Ono K., Mimura T., Oda K., Minamii T., Matsumoto S., Matsuo Y., Kawamukai M., Akihiro T.
Physiol Plant 2017   
Isolation and characterization of rice cesium transporter genes from a rice-transporter-enriched yeast expression library.
Li J.Y., Liu J., Dong D., Jia X., McCouch S.R., Kochian L.V.
Proc. Natl. Acad. Sci. U.S.A. 2014  111(17)  6503-8
Natural variation underlies alterations in Nramp aluminum transporter (NRAT1) expression and function that play a key role in rice aluminum tolerance.
Huang C.F., Yamaji N., Chen Z., Ma J.F.
Plant J. 2012  69(5)  857-67
A tonoplast-localized half-size ABC transporter is required for internal detoxification of aluminum in rice.
Famoso A.N., Zhao K., Clark R.T., Tung C.W., Wright M.H., Bustamante C., Kochian L.V., McCouch S.R.
PLoS Genet. 2011  7(8)  e1002221
Genetic architecture of aluminum tolerance in rice (Oryza sativa) determined through genome-wide association analysis and QTL mapping.
Takahashi R. , Ishimaru Y. , Senoura T. , Shimo H. , Ishikawa S. , Arao T. , Nakanishi H. , Nishizawa N.K.
J. Exp. Bot. 2011    -
The OsNRAMP1 iron transporter is involved in Cd accumulation in rice.
Xia J., Yamaji N., Kasai T., Ma J.F.
Proc. Natl. Acad. Sci. U.S.A. 2010  107(43)  18381-5
Plasma membrane-localized transporter for aluminum in rice.
Narayanan NN, Vasconcelos MW, Grusak MA.
Plant Physiol. Biochem. 2007  45(5)  277-86.
Expression profiling of Oryza sativa metal homeostasis genes in different rice cultivars using a cDNA macroarray.
TextPresso Search Search textpresso for NRAMP4 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology metal ion transport( GO:0030001 )
integral to membrane( GO:0016021 )
aluminum ion transmembrane transporter activity( GO:0015083 )
plasma membrane( GO:0005886 )
response to aluminum ion( GO:0010044 )
Trait Ontology aluminum sensitivity( TO:0000354 )
Plant Ontology leaf( PO:0025034 )
Related Strains
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Phenotype images
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Last updated
Jan 23, 2020


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