Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol DCL3B
Gene Symbol Synonym OsDCL3b
CGSNL Gene Name DICER-LIKE 3B
Gene Name Synonym Endoribonuclease Dicer homolog 3b, Dicer-like protein 3b
Protein Name DICER-LIKE PROTEIN 3B
Allele
Chromosome No. 10
Explanation Q7XD96. GO:1902893: regulation of pri-miRNA transcription by RNA polymerase II.
Trait Class Biochemical character
Seed - Physiological traits
Seed - Physiological traits - Storage substances
Character as QTL - Yield and productivity
Expression
Sequence/Locus
cDNA Accession No. DQ208406
MSU ID LOC_Os10g34430.1
RAP ID Os10g0485600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Liao P.F., Ouyang J.X., Zhang J.J., Yang L., Wang X., Peng X.J., Wang D., Zhu Y.L., Li S.B.
Plant Mol. Biol. 2019  99(3)  193-204
OsDCL3b affects grain yield and quality in rice.
Song X., Li P., Zhai J., Zhou M., Ma L., Liu B., Jeong D.H., Nakano M., Cao S., Liu C., Chu C., Wang X.J., Green P.J., Meyers B.C., Cao X.
Plant J. 2012  69(3)  462-74
Roles of DCL4 and DCL3b in rice phased small RNA biogenesis.
Kapoor M, Arora R, Lama T, Nijhawan A, Khurana JP, Tyagi AK, Kapoor S.
BMC Genomics. 2008  9  451
Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.
TextPresso Search Search textpresso for DCL3B ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology magnesium ion binding( GO:0000287 )
double-stranded RNA binding( GO:0003725 )
ribonuclease III activity( GO:0004525 )
ATP binding( GO:0005524 )
nucleus( GO:0005634 )
RNA processing( GO:0006396 )
ATP-dependent helicase activity( GO:0008026 )
plastid( GO:0009536 )
manganese ion binding( GO:0030145 )
alternative nuclear mRNA splicing, via spliceosome( GO:0000380 )
gene silencing by RNA( GO:0031047 )
Trait Ontology grain yield( TO:0000396 )
seed quality( TO:0000162 )
pollen fertility( TO:0000421 )
spikelet fertility( TO:0000180 )
seed set percent( TO:0000455 )
protein content( TO:0000598 )
amino acid content( TO:0002673 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Aug 13, 2019


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