Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
|---|---|
| CGSNL Gene Symbol | DCL3B |
| Gene Symbol Synonym | OsDCL3b |
| CGSNL Gene Name | DICER-LIKE 3B |
| Gene Name Synonym | Endoribonuclease Dicer homolog 3b, Dicer-like protein 3b |
| Protein Name | DICER-LIKE PROTEIN 3B |
| Allele | |
| Chromosome No. | 10 |
| Explanation | Q7XD96. GO:1902893: regulation of pri-miRNA transcription by RNA polymerase II. |
| Trait Class |
Biochemical character
Seed - Physiological traits Seed - Physiological traits - Storage substances Character as QTL - Yield and productivity |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
DQ208406
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| MSU ID |
LOC_Os10g34430.1
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| RAP ID |
Os10g0485600 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Liao P.F., Ouyang J.X., Zhang J.J., Yang L., Wang X., Peng X.J., Wang D., Zhu Y.L., Li S.B.
Plant Mol. Biol. 2019 99(3) 193-204 OsDCL3b affects grain yield and quality in rice.
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Song X., Li P., Zhai J., Zhou M., Ma L., Liu B., Jeong D.H., Nakano M., Cao S., Liu C., Chu C., Wang X.J., Green P.J., Meyers B.C., Cao X.
Plant J. 2012 69(3) 462-74 Roles of DCL4 and DCL3b in rice phased small RNA biogenesis.
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Kapoor M, Arora R, Lama T, Nijhawan A, Khurana JP, Tyagi AK, Kapoor S.
BMC Genomics. 2008 9 451 Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
magnesium ion binding( GO:0000287 )
double-stranded RNA binding( GO:0003725 ) ribonuclease III activity( GO:0004525 ) ATP binding( GO:0005524 ) nucleus( GO:0005634 ) RNA processing( GO:0006396 ) ATP-dependent helicase activity( GO:0008026 ) plastid( GO:0009536 ) manganese ion binding( GO:0030145 ) alternative nuclear mRNA splicing, via spliceosome( GO:0000380 ) gene silencing by RNA( GO:0031047 ) |
| Trait Ontology |
grain yield( TO:0000396 )
seed quality( TO:0000162 ) pollen fertility( TO:0000421 ) spikelet fertility( TO:0000180 ) seed set percent( TO:0000455 ) protein content( TO:0000598 ) amino acid content( TO:0002673 ) |
| Plant Ontology | - |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Aug 13, 2019 | |
