Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol DCL3A
Gene Symbol Synonym OsDCL3a
CGSNL Gene Name DICER-LIKE 3A
Gene Name Synonym Endoribonuclease Dicer homolog 3a, Dicer-like protein 3a
Protein Name DICER-LIKE PROTEIN 3A
Allele
Chromosome No. 1
Explanation EC=3.1.26.- Q5N870. LOC_Os01g68120.
Trait Class Biochemical character
Vegetative organ - Leaf
Vegetative organ - Culm
Reproductive organ - Inflorescence
Tolerance and resistance - Disease resistance
Expression
Sequence/Locus
cDNA Accession No. -
RAP ID Os01g0909200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Zhang D., Liu M., Tang M., Dong B., Wu D., Zhang Z., Zhou B.
Plant Sci. 2015  237  24-32
Repression of microRNA biogenesis by silencing of OsDCL1 activates the basal resistance to Magnaporthe oryzae in rice.
Wei L.a b, Gu L.a, Song X.a, Cui X.a b, Lu Z.a, Zhou M.a, Wang L.a, Hu F.c, Zhai J.d e, Meyers B.C.d e, Cao X.a
Proc. Natl. Acad. Sci. U.S.A. 2014  111  3877-3882
Dicer-like 3 produces transposable element-associated 24-nt siRNAs that control agricultural traits in rice
Song X., Li P., Zhai J., Zhou M., Ma L., Liu B., Jeong D.H., Nakano M., Cao S., Liu C., Chu C., Wang X.J., Green P.J., Meyers B.C., Cao X.
Plant J. 2012  69(3)  462-74
Roles of DCL4 and DCL3b in rice phased small RNA biogenesis.
Urayama S,Moriyama H,Aoki N,Nakazawa Y,Okada R,Kiyota E,Miki D,Shimamoto K,Fukuhara T
Plant Cell Physiol. 2010  51(1)  58-67
Knock-down of OsDCL2 in Rice Negatively Affects Maintenance of the Endogenous dsRNA Virus, Oryza sativa Endornavirus.
Wu L., Zhou H., Zhang Q., Zhang J., Ni F., Liu C., Qi Y.
Mol. Cell 2010  38(3)  465-75
DNA methylation mediated by a microRNA pathway.
Kapoor M, Arora R, Lama T, Nijhawan A, Khurana JP, Tyagi AK, Kapoor S.
BMC Genomics. 2008  9  451
Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.
TextPresso Search Search textpresso for DCL3A ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology magnesium ion binding( GO:0000287 )
ATP binding( GO:0005524 )
nucleus( GO:0005634 )
RNA processing( GO:0006396 )
manganese ion binding( GO:0030145 )
DNA binding( GO:0003677 )
RNA binding( GO:0003723 )
helicase activity( GO:0004386 )
ribonuclease III activity( GO:0004525 )
gene silencing by RNA( GO:0031047 )
defense response to fungus( GO:0050832 )
Trait Ontology secondary branch number( TO:0000557 )
plant height( TO:0000207 )
flag leaf angle( TO:0000124 )
blast disease( TO:0000074 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Oct 8, 2015


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