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Basic Information
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CGSNL Gene Symbol
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CDT1
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Gene Symbol Synonym
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OsCDT1, OsCCX2, CCX2, OsNCX8, NCX8
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CGSNL Gene Name
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CADMIUM TOLERANT 1
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Gene Name Synonym
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sativa DcCDT1 homologue 1, cation/Ca2+ exchanger 2, cadmium tolerance 1, Na+/Ca2+ Exchanger 8, Sodium/calcium exchanger 8
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Protein Name
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CATION/CA2+ EXCHANGER 2
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Allele
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ccx2, ccx2-1, ccx2-2
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Chromosome No.
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3
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Explanation
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onoplastic calcium exchanger. Oryza barthii: ObarCCX2: OBART03G28130, Oryza brachyantha: ObraCCX2: OB03G35770/OB03G35780, Oryza glaberrima: OglaCCX2: ORGLA03G0260000, Oryza glumipatula: OgluCCX2: OGLUM03G28760, Oryza longistaminata: OlCCX2: OLONG_012097 (only partial length sequence available), Oryza meridionalis: OmCCX2: OMERI03G24770, Oryza nivara: OnCCX2: ONIVA03G29160, Oryza punctata: OpCCX2: OPUNC03G25630, Oryza rufipogon: OrCCX2: ORUFI03G29260. TO:0006059: cadmium content trait. TO:0020096: mineral and ion transport trait.
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Trait Class
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Biochemical character
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK121052
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MSU ID
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LOC_Os03g45370.1
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RAP ID
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Os03g0656500
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Zhou Z., Liu J., Meng W., Sun Z., Tan Y., Liu Y., Tan M., Wang B., Yang J.
Plants (Basel) 2023 12(19)
Integrated Analysis of Transcriptome and Metabolome Reveals Molecular Mechanisms of Rice with Different Salinity Tolerances.
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Feng K., Li J., Yang Y., Li Z., Wu W.
Int J Mol Sci 2023 24(9)
Cadmium Absorption in Various Genotypes of Rice under Cadmium Stress.
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Zhang J., Zhu Y., Yu L., Yang M., Zou X., Yin C., Lin Y.
Cells 2022 11(3)
Research Advances in Cadmium Uptake, Transport and Resistance in Rice (<i>Oryza sativa</i> L.).
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Guo J., Zhang X., Ye D., Huang H., Wang Y., Zheng Z., Li T., Yu H.
Ecotoxicol. Environ. Saf. 2020 205 111323
Crucial roles of cadmium retention in nodeⅡ for restraining cadmium transport from straw to ear at reproductive period in a grain low-cadmium rice line (Oryza sativa L.).
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Hao X., Zeng M., Wang J., Zeng Z., Dai J., Xie Z., Yang Y., Tian L., Chen L., Li D.
Front Plant Sci 2018 9 476
A Node-Expressed Transporter OsCCX2 Is Involved in Grain Cadmium Accumulation of Rice.
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Pittman J.K., Hirschi K.D.
Rice (N Y) 2016 9(1) 3
Phylogenetic analysis and protein structure modelling identifies distinct Ca(2+)/Cation antiporters and conservation of gene family structure within Arabidopsis and rice species.
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Yadav A.K., Shankar A., Jha S.K., Kanwar P., Pandey A., Pandey G.K.
Sci Rep 2015 5 17117
A rice tonoplastic calcium exchanger, OsCCX2 mediates Ca(2+)/cation transport in yeast.
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Singh A.K., Kumar R., Tripathi A.K., Gupta B.K., Pareek A., Singla-Pareek SL.
Rice (N Y) 2015 8(1) 54
Genome-wide investigation and expression analysis of Sodium/Calcium exchanger gene family in rice and Arabidopsis.
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Singh A., Kanwar P., Yadav A.K., Mishra M., Jha S.K., Baranwal V., Pandey A., Kapoor S., Tyagi A.K., Pandey G.K.
FEBS J. 2014 281(3) 894-915
Genome-wide expressional and functional analysis of calcium transport elements during abiotic stress and development in rice.
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Xia J., Yamaji N., Ma J.F.
Plant J. 2013 76 345-355
A plasma membrane-localized small peptide is involved in rice aluminum tolerance
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Kuramata M, Masuya S, Takahashi Y, Kitagawa E, Inoue C, Ishikawa S, Youssefian S, Kusano T.
Plant Cell Physiol. 2009 50(1) 106-17.
Novel cysteine-rich peptides from Digitaria ciliaris and Oryza sativa enhance tolerance to cadmium by limiting its cellular accumulation.
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Matsuda T,Kuramata M,Takahashi Y,Kitagawa E,Youssefian S,Kusano T
Plant Signal Behav 2009 4(5) 419-21
A novel plant cysteine-rich peptide family conferring cadmium tolerance to yeast and plants.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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cadmium ion transmembrane transport( GO:0070574 )
cadmium ion transport( GO:0015691 )
phloem transport( GO:0010233 )
response to cadmium ion( GO:0046686 )
response to UV( GO:0009411 )
response to water deprivation( GO:0009414 )
response to salt stress( GO:0009651 )
response to abscisic acid stimulus( GO:0009737 )
response to metal ion( GO:0010038 )
response to iron ion( GO:0010039 )
response to zinc ion( GO:0010043 )
response to lithium ion( GO:0010226 )
response to cobalt ion( GO:0032025 )
response to calcium ion( GO:0051592 )
cadmium ion transmembrane transporter activity( GO:0015086 )
plasma membrane( GO:0005886 )
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Trait Ontology
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salt tolerance( TO:0006001 )
drought tolerance( TO:0000276 )
UV light sensitivity( TO:0000160 )
calcium sensitivity( TO:0000006 )
abscisic acid sensitivity( TO:0000615 )
iron sensitivity( TO:0000224 )
zinc sensitivity( TO:0000351 )
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Plant Ontology
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xylem( PO:0005352 )
stem node( PO:0020141 )
portion of vascular tissue( PO:0009015 )
parenchyma cell( PO:0000074 )
vascular bundle( PO:0005020 )
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Related Strains
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Phenotype images
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Last updated
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Dec 20, 2023
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Update info.