Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol AGO4A
Gene Symbol Synonym OsAGO4a, AGO4-2
CGSNL Gene Name ARGONAUTE 4A
Gene Name Synonym Protein argonaute 4A
Protein Name PROTEIN ARGONAUTE 4A
Allele
Chromosome No. 1
Explanation Q9SDG8. AGO4-2 in Li et al. 2017.
Trait Class Other
Expression
Sequence/Locus
cDNA Accession No. AK064813
MSU ID LOC_Os01g16870.1
LOC_Os01g16870.2
LOC_Os01g16870.3
LOC_Os01g16870.4
RAP ID Os01g0275600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Higo A., Saihara N., Miura F., Higashi Y., Yamada M., Tamaki S., Ito T., Tarutani Y., Sakamoto T., Fujiwara M., Kurata T., Fukao Y., Moritoh S., Terada R., Kinoshita T., Ito T., Kakutani T., Shimamoto K., Tsuji H.
Nat Commun 2020  11(1)  4079
DNA methylation is reconfigured at the onset of reproduction in rice shoot apical meristem.
Deng Y., Zhai K., Xie Z., Yang D., Zhu X., Liu J., Wang X., Qin P., Yang Y., Zhang G., Li Q., Zhang J., Wu S., Milazzo J., Mao B., Wang E., Xie H., Tharreau D., He Z.
Science 2017  355(6328)  962-965
Epigenetic regulation of antagonistic receptors confers rice blast resistance with yield balance.
Li S., Xia Q., Wang F., Yu X., Ma J., Kou H., Lin X., Gao X., Liu B.
Front Plant Sci 2017  8  363
Laser Irradiation-Induced DNA Methylation Changes Are Heritable and Accompanied with Transpositional Activation of mPing in Rice.
Wei L.a b, Gu L.a, Song X.a, Cui X.a b, Lu Z.a, Zhou M.a, Wang L.a, Hu F.c, Zhai J.d e, Meyers B.C.d e, Cao X.a
Proc. Natl. Acad. Sci. U.S.A. 2014  111  3877-3882
Dicer-like 3 produces transposable element-associated 24-nt siRNAs that control agricultural traits in rice
Yang Y., Zhong J., Ouyang Y.D., Yao J.
Gene 2013  528(2)  221-35
The integrative expression and co-expression analysis of the AGO gene family in rice.
Wu L., Zhou H., Zhang Q., Zhang J., Ni F., Liu C., Qi Y.
Mol. Cell 2010  38(3)  465-75
DNA methylation mediated by a microRNA pathway.
Kapoor M, Arora R, Lama T, Nijhawan A, Khurana JP, Tyagi AK, Kapoor S.
BMC Genomics. 2008  9  451
Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology nucleic acid binding( GO:0003676 )
gene silencing by RNA( GO:0031047 )
Trait Ontology gibberellic acid content( TO:0002675 )
brassinosteroid content( TO:0002676 )
Plant Ontology vegetative shoot apical meristem( PO:0008016 )
Related Strains
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Phenotype images
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Last updated
Jun 28, 2023

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