Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
|---|---|
| CGSNL Gene Symbol | AGO2 |
| Gene Symbol Synonym | OsAGO2 |
| CGSNL Gene Name | ARGONAUTE 2 |
| Gene Name Synonym | sativa Argonaute 2, Protein argonaute 2, ARGONAUTE2 |
| Protein Name | PROTEIN ARGONAUTE 2 |
| Allele | ago2, Osago2 |
| Chromosome No. | 4 |
| Explanation | Q7XTS4. The RNA-seq and ChIP-seq data (BioProject PRJCA001920) can be found in the Beijing Institute of Genomics Data Center (http://bigd.big.ac.cn) under accession numbers CRA002105, CRA002106, CRA002107, and CRA002109. GO:1903428: positive regulation of reactive oxygen species biosynthetic process. GO:1905643: positive regulation of DNA methylation. |
| Trait Class |
Seed - Morphological traits - Grain shape
Tolerance and resistance - Disease resistance Tolerance and resistance - Stress tolerance Other |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK120766
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| MSU ID |
LOC_Os04g52540.1
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| RAP ID |
Os04g0615700 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Huo C., Zhang B., Wang R.
Plant Signal Behav 2022 17(1) 2004035 Research progress on plant noncoding RNAs in response to low-temperature stress.
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Wang Z., Chen D., Sun F., Guo W., Wang W., Li X., Lan Y., Du L., Li S., Fan Y., Zhou Y., Zhao H., Zhou T.
Mol. Plant Pathol. 2021 22(9) 1029-1040 ARGONAUTE 2 increases rice susceptibility to rice black-streaked dwarf virus infection by epigenetically regulating HEXOKINASE 1 expression.
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Xu Y., Wang R., Wang Y., Zhang L., Yao S.
Plant Cell Environ. 2020 43(4) 992-1007 A point mutation in ltt1 enhances cold tolerance at the booting stage in rice.
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Yin W., Xiao Y., Niu M., Meng W., Li L., Zhang X., Liu D., Zhang G., Qian Y., Sun Z., Huang R., Wang S., Liu C.M., Chu C., Tong H.
Plant Cell 2020 32(7) 2292-2306 ARGONAUTE2 Enhances Grain Length and salt tolerance by Activating <i>BIG GRAIN3</i> to Modulate Cytokinin Distribution in Rice.
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Yang Y., Zhong J., Ouyang Y.D., Yao J.
Gene 2013 528(2) 221-35 The integrative expression and co-expression analysis of the AGO gene family in rice.
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Kapoor M, Arora R, Lama T, Nijhawan A, Khurana JP, Tyagi AK, Kapoor S.
BMC Genomics. 2008 9 451 Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.
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| TextPresso Search | Search textpresso for AGO2 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
response to cold( GO:0009409 )
DNA methylation( GO:0006306 ) negative regulation of defense response to virus( GO:0050687 ) defense response to virus( GO:0051607 ) gene silencing by RNA( GO:0031047 ) membrane lipid catabolic process( GO:0046466 ) response to abscisic acid stimulus( GO:0009737 ) cytokinin metabolic process( GO:0009690 ) seed development( GO:0048316 ) response to salt stress( GO:0009651 ) nucleic acid binding( GO:0003676 ) |
| Trait Ontology |
grain length( TO:0000734 )
salt tolerance( TO:0006001 ) cytokinin content( TO:0002660 ) abscisic acid sensitivity( TO:0000615 ) black streak dwarf virus resistance( TO:0000020 ) hydrogen peroxide content( TO:0000605 ) cold tolerance( TO:0000303 ) |
| Plant Ontology | - |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Jul 11, 2022 | |
