Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol AGO1D
Gene Symbol Synonym OsAGO1d, AGO1d
CGSNL Gene Name ARGONAUTE 1D
Gene Name Synonym Protein argonaute 1D
Protein Name PROTEIN ARGONAUTE 1D
Allele
Chromosome No. 6
Explanation Q5Z5B2. an OsMIR168a's target gene.
Trait Class Other
Expression
Sequence/Locus
cDNA Accession No. AK122176
MSU ID LOC_Os06g51310.1
LOC_Os06g51310.2
RAP ID Os06g0729300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Liu C., Li N., Lu Z., Sun Q., Pang X., Xiang X., Deng C., Xiong Z., Shu K., Yang F., Hu Z.
Front Plant Sci 2022  13  839457
CG and CHG Methylation Contribute to the Transcriptional Control of OsPRR37-output Genes in Rice.
Zhou J., Zhang R., Jia X., Tang X., Guo Y., Yang H., Zheng X., Qian Q., Qi Y., Zhang Y.
Plant Biotechnol. J. 2022  20(2)  310-322
CRISPR-Cas9 mediated OsMIR168a knockout reveals its pleiotropy in rice.
Araki S., Le N.T., Koizumi K., Villar-Briones A., Nonomura K.I., Endo M., Inoue H., Saze H., Komiya R.
Nat Commun 2020  11(1)  3115
miR2118-dependent U-rich phasiRNA production in rice anther wall development.
Fei Q., Yang L., Liang W., Zhang D., Meyers B.C.
J. Exp. Bot. 2016  67(21)  6037-6049
Dynamic changes of small RNAs in rice spikelet development reveal specialized reproductive phasiRNA pathways.
Wu J., Yang Z., Wang Y., Zheng L., Ye R., Ji Y., Zhao S., Ji S., Liu R., Xu L., Zheng H., Zhou Y., Zhang X., Cao X., Xie L., Wu Z., Qi Y., Li Y.
Elife 2015  4 
Viral-inducible Argonaute18 confers broad-spectrum virus resistance in rice by sequestering a host microRNA.
Yang Y., Zhong J., Ouyang Y.D., Yao J.
Gene 2013  528(2)  221-35
The integrative expression and co-expression analysis of the AGO gene family in rice.
Wu L,Zhang Q,Zhou H,Ni F,Wu X,Qi Y
Plant Cell 2009  21(11)  3421-35
Rice MicroRNA effector complexes and targets.
Kapoor M, Arora R, Lama T, Nijhawan A, Khurana JP, Tyagi AK, Kapoor S.
BMC Genomics. 2008  9  451
Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.
TextPresso Search Search textpresso for AGO1D ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology nucleic acid binding( GO:0003676 )
mitochondrion( GO:0005739 )
gene silencing by RNA( GO:0031047 )
Trait Ontology -
Plant Ontology anther( PO:0009066 )
anther wall( PO:0000002 )
Related Strains
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Phenotype images
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Last updated
Jun 22, 2022


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