Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol AGO1C
Gene Symbol Synonym OsAGO1c, OsAGO1, AGO1, AGO1c
CGSNL Gene Name ARGONAUTE 1C
Gene Name Synonym Protein argonaute 1C, Protein argonaute 1, argonaute1
Protein Name PROTEIN ARGONAUTE 1C
Allele
Chromosome No. 2
Explanation AB081951. Q6K972. targeted by miR168 (Qin et al. 2017). osa-miR168a target gene.
Trait Class Seed - Physiological traits
Other
Expression
Sequence/Locus
cDNA Accession No. AK103279
MSU ID LOC_Os02g58490.1
RAP ID Os02g0831600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Huang J., Wang R., Dai X., Feng J., Zhang H., Zhao P.X.
J. Exp. Bot. 2019  70(6)  1767-1774
A microRNA biogenesis-like pathway for producing phased small interfering RNA from a long non-coding RNA in rice.
Zhou Y., Zhou S., Wang L., Wu D., Cheng H., Du X., Mao D., Zhang C., Jiang X.
J Integr Plant Biol 2019   
miR164c and miR168a regulate seed vigor in rice.
Qin J., Tang Z., Ma X., Meng Y.
Gene 2017   
Investigating the regulatory roles of the microRNAs and the Argonaute 1-enriched small RNAs in plant metabolism.
Wu J., Yang Z., Wang Y., Zheng L., Ye R., Ji Y., Zhao S., Ji S., Liu R., Xu L., Zheng H., Zhou Y., Zhang X., Cao X., Xie L., Wu Z., Qi Y., Li Y.
Elife 2015  4 
Viral-inducible Argonaute18 confers broad-spectrum virus resistance in rice by sequestering a host microRNA.
Yang Y., Zhong J., Ouyang Y.D., Yao J.
Gene 2013  528(2)  221-35
The integrative expression and co-expression analysis of the AGO gene family in rice.
Wu L., Zhou H., Zhang Q., Zhang J., Ni F., Liu C., Qi Y.
Mol. Cell 2010  38(3)  465-75
DNA methylation mediated by a microRNA pathway.
Wu L,Zhang Q,Zhou H,Ni F,Wu X,Qi Y
Plant Cell 2009  21(11)  3421-35
Rice MicroRNA effector complexes and targets.
Kapoor M, Arora R, Lama T, Nijhawan A, Khurana JP, Tyagi AK, Kapoor S.
BMC Genomics. 2008  9  451
Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.
Nishimura,A., Ito,M., Kamiya,N., Sato,Y. and Matsuoka,M.
Plant J. 2002  30(2)  189-201
OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice.
TextPresso Search Search textpresso for AGO1C ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology nucleic acid binding( GO:0003676 )
gene silencing by RNA( GO:0031047 )
Trait Ontology seed viability( TO:0000345 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 22, 2020


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