Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol AGO1B
Gene Symbol Synonym OsAGO1b, AGO1b, AGO1-2
CGSNL Gene Name ARGONAUTE 1B
Gene Name Synonym Protein argonaute 1B
Protein Name PROTEIN ARGONAUTE 1B
Allele
Chromosome No. 4
Explanation Q7XSA2. AGO1-2 in Li et al. 2017. TO:0006064: rolled leaf. TO:1000022: anther morphology trait. osa-miR168 target gene.
Trait Class Other
Vegetative organ - Leaf
Vegetative organ - Culm
Reproductive organ - Pollination, fertilization, fertility
Reproductive organ - Spikelet, flower, glume, awn
Expression
Sequence/Locus
cDNA Accession No. AK111996
MSU ID LOC_Os04g47870.1
LOC_Os04g47870.2
RAP ID Os04g0566500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Liu C., Li N., Lu Z., Sun Q., Pang X., Xiang X., Deng C., Xiong Z., Shu K., Yang F., Hu Z.
Front Plant Sci 2022  13  839457
CG and CHG Methylation Contribute to the Transcriptional Control of OsPRR37-output Genes in Rice.
Zhou J., Zhang R., Jia X., Tang X., Guo Y., Yang H., Zheng X., Qian Q., Qi Y., Zhang Y.
Plant Biotechnol. J. 2022  20(2)  310-322
CRISPR-Cas9 mediated OsMIR168a knockout reveals its pleiotropy in rice.
Jia Y., Li C., Li Q., Liu P., Liu D., Liu Z., Wang Y., Jiang G., Zhai W.
Int J Mol Sci 2020  21(3) 
Characteristic Dissection of <i>Xanthomonas oryzae</i> pv. o<i>ryzae</i> Responsive MicroRNAs in Rice.
Araki S., Le N.T., Koizumi K., Villar-Briones A., Nonomura K.I., Endo M., Inoue H., Saze H., Komiya R.
Nat Commun 2020  11(1)  3115
miR2118-dependent U-rich phasiRNA production in rice anther wall development.
Huang J., Wang R., Dai X., Feng J., Zhang H., Zhao P.X.
J. Exp. Bot. 2019  70(6)  1767-1774
A microRNA biogenesis-like pathway for producing phased small interfering RNA from a long non-coding RNA in rice.
Li Y., Yang Y., Liu Y., Li D., Zhao Y., Li Z., Liu Y., Jiang D., Li J., Zhou H., Chen J., Zhuang C., Liu Z.
Rice (N Y) 2019  12(1)  60
Overexpression of OsAGO1b Induces Adaxially Rolled Leaves by Affecting Leaf Abaxial Sclerenchymatous Cell Development in Rice.
Li S., Xia Q., Wang F., Yu X., Ma J., Kou H., Lin X., Gao X., Liu B.
Front Plant Sci 2017  8  363
Laser Irradiation-Induced DNA Methylation Changes Are Heritable and Accompanied with Transpositional Activation of mPing in Rice.
Wu J., Yang Z., Wang Y., Zheng L., Ye R., Ji Y., Zhao S., Ji S., Liu R., Xu L., Zheng H., Zhou Y., Zhang X., Cao X., Xie L., Wu Z., Qi Y., Li Y.
Elife 2015  4 
Viral-inducible Argonaute18 confers broad-spectrum virus resistance in rice by sequestering a host microRNA.
Yang Y., Zhong J., Ouyang Y.D., Yao J.
Gene 2013  528(2)  221-35
The integrative expression and co-expression analysis of the AGO gene family in rice.
Wu L., Zhou H., Zhang Q., Zhang J., Ni F., Liu C., Qi Y.
Mol. Cell 2010  38(3)  465-75
DNA methylation mediated by a microRNA pathway.
Wu L,Zhang Q,Zhou H,Ni F,Wu X,Qi Y
Plant Cell 2009  21(11)  3421-35
Rice MicroRNA effector complexes and targets.
Kapoor M, Arora R, Lama T, Nijhawan A, Khurana JP, Tyagi AK, Kapoor S.
BMC Genomics. 2008  9  451
Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.
TextPresso Search Search textpresso for AGO1B ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology nucleic acid binding( GO:0003676 )
gene silencing by RNA( GO:0031047 )
nucleus( GO:0005634 )
cytoplasm( GO:0005737 )
leaf development( GO:0048366 )
Trait Ontology leaf development trait( TO:0000655 )
tiller number( TO:0000346 )
plant height( TO:0000207 )
seed set percent( TO:0000455 )
pollen fertility( TO:0000421 )
Plant Ontology leaf( PO:0025034 )
leaf development stage( PO:0001050 )
anther wall( PO:0000002 )
Related Strains
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Phenotype images
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Last updated
Jun 22, 2022

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