Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol AGPL3
Gene Symbol Synonym OsAGPL3, APL3, OsAPL3, AGPlar, OsAGPL1, AGPL1
CGSNL Gene Name ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 3
Gene Name Synonym sativa ADP-glucose pyrophosphorylase large subunit 3, ADP-glucose Pyrophosphorylase large subunit 3, AGPase large subunit 3, AGPase large unit 1, AGPase L1
Protein Name ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 3
Allele
Chromosome No. 5
Explanation EC=2.7.7.27 Adenosine diphosphate glucose pyrophosphorylase. AC007858, AP120988. D50317. BGIOSGA017490. OsAGPL1 in Lee et al. 2007, Lu et al. 2012, Yang et al. 2015, Morita et al. 2015, Long et al. 2018, Zhu et al. 2018, Lee et al. 2019, Baysal et al. 2020, Liao et al. 2022.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK100910
MSU ID LOC_Os05g50380.1
LOC_Os05g50380.2
RAP ID Os05g0580000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Liao Y., Ali A., Xue Z., Zhou X., Ye W., Guo D., Liao Y., Jiang P., Wu T., Zhang H., Xu P., Chen X., Zhou H., Liu Y., Wang W., Wu X.
Int J Mol Sci 2022  23(7) 
Disruption of <i>LLM9428</i>/<i>OsCATC</i> Represses Starch Metabolism and Confers Enhanced Blast Resistance in Rice.
Chen Z., Wang Y., Huang R., Zhang Z., Huang J., Yu F., Lin Y., Guo Y., Liang K., Zhou Y., Chen F.
BMC Plant Biol. 2022  22(1)  137
Integration of transcriptomic and proteomic analyses reveals several levels of metabolic regulation in the excess starch and early senescent leaf mutant LSES1 in rice.
Liu C., Ma T., Yuan D., Zhou Y., Long Y., Li Z., Dong Z., Duan M., Yu D., Jing Y., Bai X., Wang Y., Hou Q., Liu S., Zhang J.S., Chen S.Y., Li D., Liu X., Li Z., Wang W., Li J., Wei X., Ma B., Wan X.
Plant Biotechnol. J. 2022  20(8)  1470-1486
The OsEIL1-OsERF115-target gene regulatory module controls grain size and weight in rice.
Baysal C., He W., Drapal M., Villorbina G., Medina V., Capell T., Khush G.S., Zhu C., Fraser P.D., Christou P.
Proc. Natl. Acad. Sci. U.S.A. 2020  117(42)  26503-26512
Inactivation of rice starch branching enzyme IIb triggers broad and unexpected changes in metabolism by transcriptional reprogramming.
Lee H.S., Hwang W.H., Jeong J.H., Ahn S.H., Baek J.S., Jeong H.Y., Park H.K., Ku B.I., Yun J.T., Lee G.H., Choi K.J.
BMC Genomics 2019  20(1)  18
Analysis of the distribution of assimilation products and the characteristics of transcriptomes in rice by submergence during the ripening stage.
Long W., Wang Y., Zhu S., Jing W., Wang Y., Ren Y., Tian Y., Liu S., Liu X., Chen L., Wang D., Zhong M., Zhang Y., Hu T., Zhu J., Hao Y., Zhu X., Zhang W., Wang C., Zhang W., Wan J.
Plant Physiol. 2018  177(2)  698-712
FLOURY shrunken endosperm1 Connects Phospholipid Metabolism and Amyloplast Development in Rice.
Zhu X., Shen W., Huang J., Zhang T., Zhang X., Cui Y., Sang X., Ling Y., Li Y., Wang N., Zhao F., Zhang C., Yang Z., He G.
Plant Cell Physiol. 2018  59(3)  487-499
Mutation of the OsSAC1 Gene, which Encodes an Endoplasmic Reticulum Protein with an Unknown Function, Causes Sugar Accumulation in Rice Leaves.
Pérez L., Soto E., Villorbina G., Bassie L., Medina V., Muñoz P., Capell T., Zhu C., Christou P., Farré G.
Transgenic Res. 2018  27(5)  423-439
CRISPR/Cas9-induced monoallelic mutations in the cytosolic AGPase large subunit gene APL2 induce the ectopic expression of APL2 and the corresponding small subunit gene APS2b in rice leaves.
Yang J., Kim S.R., Lee S.K., Choi H., Jeon J.S., An G.
Plant Sci. 2015  240  79-89
Alanine aminotransferase 1 (OsAlaAT1) plays an essential role in the regulation of starch storage in rice endosperm.
Morita R., Sugino M., Hatanaka T., Misoo S., Fukayama H.
Plant Physiol. 2015  167(4)  1321-31
CO2-Responsive CONSTANS, CONSTANS-Like, and Time of Chlorophyll a/b Binding Protein Expression1 Protein Is a Positive Regulator of Starch Synthesis in Vegetative Organs of Rice.
Lu F.H., Park Y.J.
Genet Res (Camb) 2012  94  179-189
Sequence variations in OsAGPase significantly associated with amylose content and viscosity properties in rice (Oryza sativa L.)
Yan CJ,Tian ZX,Fang YW,Yang YC,Li J,Zeng SY,Gu SL,Xu CW,Tang SZ,Gu MH
Theor. Appl. Genet. 2011  122(1)  63-76
Genetic analysis of starch paste viscosity parameters in glutinous rice (Oryza sativa L.).
Tian,Z., Qian,Q., Liu,Q., Yan,M., Liu,X., Yan,C., Liu,G., Gao,Z., Tang,S., Zeng,D., Wang,Y., Yu,J., Gu,M. and Li,J.
Proc. Natl. Acad. Sci. U.S.A. 2009  106(51)  21760-5
Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities
Lee SK, Hwang SK, Han M, Eom JS, Kang HG, Han Y, Choi SB, Cho MH, Bhoo SH, An G, Hahn TR, Okita TW, Jeon JS.
Plant Mol. Biol. 2007  65(4)  531-46.
Identification of the ADP-glucose pyrophosphorylase isoforms essential for starch synthesis in the leaf and seed endosperm of rice (Oryza sativa L.).
TextPresso Search Search textpresso for AGPL3 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0101321
Ontologies
Gene Ontology glucose-1-phosphate adenylyltransferase activity( GO:0008878 )
nucleotidyltransferase activity( GO:0016779 )
starch biosynthetic process( GO:0019252 )
biosynthetic process( GO:0009058 )
plastid( GO:0009536 )
response to flooding( GO:0009413 )
Trait Ontology submergence sensitivity( TO:0000286 )
Plant Ontology endosperm( PO:0009089 )
Related Strains
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Phenotype images
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Last updated
Aug 30, 2022


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