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Basic Information
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CGSNL Gene Symbol
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RR6
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Gene Symbol Synonym
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OsRR6, rr6, Rra6, OsRRA6
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CGSNL Gene Name
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A-TYPE RESPONSE REGULATOR 6
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Gene Name Synonym
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A-TYPE response regulator 6, Type A response regulator 6, A-type RR 6
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Protein Name
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A-TYPE RESPONSE REGULATOR 6
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Allele
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Chromosome No.
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4
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Explanation
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BR000315. AB249653.
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Trait Class
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Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK059734
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MSU ID
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LOC_Os04g57720.1
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RAP ID
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Os04g0673300
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Saha S.R., Islam S.M.S., Itoh K.
Genes Genet. Syst. 2024
Identification of abiotic stress responsive genes: A genome wide analysis of the cytokinin response regulator gene family in rice.
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Mei W., Chen W., Wang Y., Liu Z., Dong Y., Zhang G., Deng H., Liu X., Lu X., Wang F., Chen G., Tang W., Xiao Y.
Int J Mol Sci 2023 24(7)
Exogenous Kinetin Modulates ROS Homeostasis to Affect heat tolerance in Rice Seedlings.
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Wu B., Chen S., Cheng S., Li C., Li S., Chen J., Zha W., Liu K., Xu H., Li P., Shi S., Yang G., Chen Z., Liu K., You A., Zhou L.
Int J Mol Sci 2023 24(3)
Transcriptome Analysis Revealed the Dynamic and Rapid Transcriptional Reprogramming Involved in Cold Stress and Related Core Genes in the Rice Seedling Stage.
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Duan J., Yu H., Yuan K., Liao Z., Meng X., Jing Y., Liu G., Chu J., Li J.
Proc. Natl. Acad. Sci. U.S.A. 2019 116(28) 14319-14324
Strigolactone promotes cytokinin degradation through transcriptional activation of <i>CYTOKININ OXIDASE/DEHYDROGENASE 9</i> in rice.
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Tian L., Chou H.L., Zhang L., Hwang S.K., Starkenburg S.R., Doroshenk K.A., Kumamaru T., Okita T.W.
Plant Cell 2018 30(10) 2529-2552
RNA-binding protein RBP-P Is Required for Glutelin and Prolamine mRNA Localization in Rice Endosperm Cells.
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Song S., Li L., Li Y., Wang T., Fu X.
Molecular Breeding 2017 38
Overexpression of gene OsSUI1 affects floral organ development in rice (Oryza sativa L.)
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Tao J., Sun H., Gu P., Liang Z., Chen X., Lou J., Xu G., Zhang Y.
Plant Methods 2017 13 89
A sensitive synthetic reporter for visualizing cytokinin signaling output in rice.
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Hua L., Wang D.R., Tan L., Fu Y., Liu F., Xiao L., Zhu Z., Fu Q., Sun X., Gu P., Cai H., McCouch S.R., Sun C.
Plant Cell 2015 27(7) 1875-88
LABA1, a Domestication Gene Associated with Long, Barbed Awns in Wild Rice.
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Takano S., Matsuda S., Funabiki A., Furukawa J., Yamauchi T., Tokuji Y., Nakazono M., Shinohara Y., Takamure I., Kato K.
Plant Sci. 2015 236 75-88
The rice RCN11 gene encodes beta1,2-xylosyltransferase and is required for plant responses to abiotic stresses and phytohormones.
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El-Kereamy A., Bi Y.M., Mahmood K., Ranathunge K., Yaish M.W., Nambara E., Rothstein S.J.
Front Plant Sci 2015 6 934
Overexpression of the CC-type glutaredoxin, OsGRX6 affects hormone and nitrogen status in rice plants.
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Fanata W.I., Lee K.H., Son B.H., Yoo J.Y., Harmoko R., Ko K.S., Ramasamy N.K., Kim K.H., Oh D.B., Jung H.S., Kim J.Y., Lee S.Y., Lee K.O.
Plant J. 2013 73(6) 966-79
N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa.
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Jiang C.J., Shimono M., Sugano S., Kojima M., Liu X., Inoue H., Sakakibara H., Takatsuji H.
Mol. Plant Microbe Interact. 2013 26(3) 287-96
Cytokinins act synergistically with salicylic acid to activate defense gene expression in rice.
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Tsai Y.C., Weir N.R., Hill K., Zhang W., Kim H.J., Shiu S.H., Schaller G.E., Kieber J.J.
Plant Physiol. 2012 158(4) 1666-84
Characterization of genes involved in cytokinin signaling and metabolism from rice.
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Zhang C.C., Yuan W.Y., Zhang Q.F.
Mol Plant 2012 5(2) 482-93
RPL1, a Gene Involved in Epigenetic Processes Regulates Phenotypic Plasticity in Rice.
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Itoh J.I., Hibara K.I., Kojima M., Sakakibara H., Nagato Y.
Plant J. 2012 72 869-881
Rice DECUSSATE controls phyllotaxy by affecting the cytokinin signaling pathway.
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Hirose,N., Makita,N., Kojima,M., Kamada-Nobusada,T. and Sakakibara,H.
Plant Cell Physiol. 2007 48(3) 523-539
Overexpression of a type-a response regulator alters rice morphology and cytokinin metabolism.
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Jain M,Tyagi AK,Khurana JP
BMC Plant Biol 2006 6 1
Molecular characterization and differential expression of cytokinin-responsive type-A response regulators in rice (Oryza sativa).
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Ito,Y. and Kurata,N.
Gene 2006 382 57-65
Identification and characterization of cytokinin-signalling gene families in rice.
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Pareek A, Singh A, Kumar M, Kushwaha HR, Lynn AM, Singla-Pareek SL.
Plant Physiol. 2006 142(2) 380-97
Whole-genome analysis of Oryza sativa reveals similar architecture of two-component signaling machinery with Arabidopsis.
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DB Reference
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Gramene ID
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GR:0020060
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Ontologies
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Gene Ontology
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response to water deprivation( GO:0009414 )
response to osmotic stress( GO:0006970 )
response to wounding( GO:0009611 )
response to alkalinity( GO:0010446 )
nucleus( GO:0005634 )
response to heat( GO:0009408 )
response to cold( GO:0009409 )
mitochondrion( GO:0005739 )
plastid( GO:0009536 )
regulation of transcription( GO:0045449 )
response to cytokinin stimulus( GO:0009735 )
two-component signal transduction system (phosphorelay)( GO:0000160 )
two-component response regulator activity( GO:0000156 )
cytokinin mediated signaling( GO:0009736 )
response to auxin stimulus( GO:0009733 )
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Trait Ontology
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cytokinin sensitivity( TO:0000167 )
auxin sensitivity( TO:0000163 )
cold tolerance( TO:0000303 )
heat tolerance( TO:0000259 )
alkali sensitivity( TO:0000481 )
osmotic response sensitivity( TO:0000095 )
drought tolerance( TO:0000276 )
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Plant Ontology
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Related Strains
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Phenotype images
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Last updated
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Oct 9, 2024
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Update info.