|
Basic Information
|
|
CGSNL Gene Symbol
|
RR5
|
|
Gene Symbol Synonym
|
rr5, OsRR5, Rra4, OsRRA4
|
|
CGSNL Gene Name
|
A-TYPE RESPONSE REGULATOR 5
|
|
Gene Name Synonym
|
A-TYPE response regulator 5, Type A response regulator 5, A-type RR 4
|
|
Protein Name
|
A-TYPE RESPONSE REGULATOR 5
|
|
Allele
|
|
|
Chromosome No.
|
4
|
|
Explanation
|
A-type RR. BR000314. AB249654. GO:1902347: response to strigolactone.
|
|
Trait Class
|
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK106426
|
|
MSU ID
|
LOC_Os04g44280.1
|
|
RAP ID
|
Os04g0524300
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
-
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
|
|
Wang J., Wan R., Nie H., Xue S., Fang Z.
The Crop Journal 2022 10 397-406
OsNPF5.16, a nitrate transporter gene with natural variation, is essential for rice growth and yield
|
|
Qin B., Lu T., Xu Y., Shen W., Liu F., Xie X., Li Y., Wang K., Li R.
BMC Plant Biol. 2021 21(1) 298
Identification and characterization of An-4, a potential quantitative trait locus for awn development in rice.
|
|
Duan J., Yu H., Yuan K., Liao Z., Meng X., Jing Y., Liu G., Chu J., Li J.
Proc. Natl. Acad. Sci. U.S.A. 2019 116(28) 14319-14324
Strigolactone promotes cytokinin degradation through transcriptional activation of <i>CYTOKININ OXIDASE/DEHYDROGENASE 9</i> in rice.
|
|
Tao J., Sun H., Gu P., Liang Z., Chen X., Lou J., Xu G., Zhang Y.
Plant Methods 2017 13 89
A sensitive synthetic reporter for visualizing cytokinin signaling output in rice.
|
|
Zhang C.C., Yuan W.Y., Zhang Q.F.
Mol Plant 2012 5(2) 482-93
RPL1, a Gene Involved in Epigenetic Processes Regulates Phenotypic Plasticity in Rice.
|
|
Tsai Y.C., Weir N.R., Hill K., Zhang W., Kim H.J., Shiu S.H., Schaller G.E., Kieber J.J.
Plant Physiol. 2012 158(4) 1666-84
Characterization of genes involved in cytokinin signaling and metabolism from rice.
|
|
Itoh J.I., Hibara K.I., Kojima M., Sakakibara H., Nagato Y.
Plant J. 2012 72 869-881
Rice DECUSSATE controls phyllotaxy by affecting the cytokinin signaling pathway.
|
|
Hirose,N., Makita,N., Kojima,M., Kamada-Nobusada,T. and Sakakibara,H.
Plant Cell Physiol. 2007 48(3) 523-539
Overexpression of a type-a response regulator alters rice morphology and cytokinin metabolism.
|
|
Jain M,Tyagi AK,Khurana JP
BMC Plant Biol 2006 6 1
Molecular characterization and differential expression of cytokinin-responsive type-A response regulators in rice (Oryza sativa).
|
|
Pareek A, Singh A, Kumar M, Kushwaha HR, Lynn AM, Singla-Pareek SL.
Plant Physiol. 2006 142(2) 380-97
Whole-genome analysis of Oryza sativa reveals similar architecture of two-component signaling machinery with Arabidopsis.
|
|
Ito,Y. and Kurata,N.
Gene 2006 382 57-65
Identification and characterization of cytokinin-signalling gene families in rice.
|
|
TextPresso Search
|
Search textpresso for RR5
( Recent references may be retrievable, but without any warranty )
|
|
DB Reference
|
|
Gramene ID
|
GR:0020059
|
|
Ontologies
|
|
Gene Ontology
|
regulation of transcription( GO:0045449 )
two-component signal transduction system (phosphorelay)( GO:0000160 )
two-component response regulator activity( GO:0000156 )
response to cytokinin stimulus( GO:0009735 )
mitochondrion( GO:0005739 )
|
|
Trait Ontology
|
cytokinin sensitivity( TO:0000167 )
|
|
Plant Ontology
|
-
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Jul 7, 2022
|
Update info.
Click here for feedback