Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol RR5
Gene Symbol Synonym rr5, OsRR5, Rra4, OsRRA4
Gene Name Synonym A-TYPE response regulator 5, Type A response regulator 5, A-type RR 4
Chromosome No. 4
Explanation A-type RR. BR000314. AB249654. GO:1902347: response to strigolactone.
Trait Class
cDNA Accession No. AK106426
MSU ID LOC_Os04g44280.1
RAP ID Os04g0524300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map

Wang J., Wan R., Nie H., Xue S., Fang Z.
The Crop Journal 2022  10  397-406
OsNPF5.16, a nitrate transporter gene with natural variation, is essential for rice growth and yield
Qin B., Lu T., Xu Y., Shen W., Liu F., Xie X., Li Y., Wang K., Li R.
BMC Plant Biol. 2021  21(1)  298
Identification and characterization of An-4, a potential quantitative trait locus for awn development in rice.
Duan J., Yu H., Yuan K., Liao Z., Meng X., Jing Y., Liu G., Chu J., Li J.
Proc. Natl. Acad. Sci. U.S.A. 2019  116(28)  14319-14324
Strigolactone promotes cytokinin degradation through transcriptional activation of <i>CYTOKININ OXIDASE/DEHYDROGENASE 9</i> in rice.
Tao J., Sun H., Gu P., Liang Z., Chen X., Lou J., Xu G., Zhang Y.
Plant Methods 2017  13  89
A sensitive synthetic reporter for visualizing cytokinin signaling output in rice.
Zhang C.C., Yuan W.Y., Zhang Q.F.
Mol Plant 2012  5(2)  482-93
RPL1, a Gene Involved in Epigenetic Processes Regulates Phenotypic Plasticity in Rice.
Tsai Y.C., Weir N.R., Hill K., Zhang W., Kim H.J., Shiu S.H., Schaller G.E., Kieber J.J.
Plant Physiol. 2012  158(4)  1666-84
Characterization of genes involved in cytokinin signaling and metabolism from rice.
Itoh J.I., Hibara K.I., Kojima M., Sakakibara H., Nagato Y.
Plant J. 2012  72  869-881
Rice DECUSSATE controls phyllotaxy by affecting the cytokinin signaling pathway.
Hirose,N., Makita,N., Kojima,M., Kamada-Nobusada,T. and Sakakibara,H.
Plant Cell Physiol. 2007  48(3)  523-539
Overexpression of a type-a response regulator alters rice morphology and cytokinin metabolism.
Jain M,Tyagi AK,Khurana JP
BMC Plant Biol 2006  6  1
Molecular characterization and differential expression of cytokinin-responsive type-A response regulators in rice (Oryza sativa).
Pareek A, Singh A, Kumar M, Kushwaha HR, Lynn AM, Singla-Pareek SL.
Plant Physiol. 2006  142(2)  380-97
Whole-genome analysis of Oryza sativa reveals similar architecture of two-component signaling machinery with Arabidopsis.
Ito,Y. and Kurata,N.
Gene 2006  382  57-65
Identification and characterization of cytokinin-signalling gene families in rice.
TextPresso Search Search textpresso for RR5 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0020059
Gene Ontology regulation of transcription( GO:0045449 )
two-component signal transduction system (phosphorelay)( GO:0000160 )
two-component response regulator activity( GO:0000156 )
response to cytokinin stimulus( GO:0009735 )
mitochondrion( GO:0005739 )
Trait Ontology cytokinin sensitivity( TO:0000167 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Jul 7, 2022