Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol RR4
Gene Symbol Synonym rr4, OsRR4, Rra3, OsRRA3
Gene Name Synonym A-TYPE response regulator 4, Type A response regulator 4, A-type RR 3
Chromosome No. 1
Explanation A-type RR. BR000258. AB249658.
Trait Class Tolerance and resistance - Stress tolerance
cDNA Accession No. AK101721
MSU ID LOC_Os01g72330.1
RAP ID Os01g0952500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Xiao Y., Zhang J., Yu G., Lu X., Mei W., Deng H., Zhang G., Chen G., Chu C., Tong H., Tang W.
Front Plant Sci 2020  11  618560
Endoplasmic Reticulum-Localized PURINE PERMEASE1 Regulates plant height and grain weight by Modulating Cytokinin Distribution in Rice.
Mao C., He J., Liu L., Deng Q., Yao X., Liu C., Qiao Y., Li P., Ming F.
Plant Biotechnol. J. 2020  18(2)  429-442
OsNAC2 integrates auxin and cytokinin pathways to modulate rice root development.
Xiao Y., Liu D., Zhang G., Gao S., Liu L., Xu F., Che R., Wang Y., Tong H., Chu C.
J Integr Plant Biol 2018   
Big Grain3, encoding a purine permease, regulates grain size via modulating cytokinin transport in rice.
Tao J., Sun H., Gu P., Liang Z., Chen X., Lou J., Xu G., Zhang Y.
Plant Methods 2017  13  89
A sensitive synthetic reporter for visualizing cytokinin signaling output in rice.
Hua L., Wang D.R., Tan L., Fu Y., Liu F., Xiao L., Zhu Z., Fu Q., Sun X., Gu P., Cai H., McCouch S.R., Sun C.
Plant Cell 2015  27(7)  1875-88
LABA1, a Domestication Gene Associated with Long, Barbed Awns in Wild Rice.
Yang Y.W., Chen H.C., Jen W.F., Liu L.Y., Chang M.C.
PLoS ONE 2015  10(7)  e0131391
Comparative Transcriptome Analysis of Shoots and Roots of TNG67 and TCN1 Rice Seedlings under Cold Stress and Following Subsequent Recovery: Insights into Metabolic Pathways, Phytohormones, and Transcription Factors.
El-Kereamy A., Bi Y.M., Mahmood K., Ranathunge K., Yaish M.W., Nambara E., Rothstein S.J.
Front Plant Sci 2015  6  934
Overexpression of the CC-type glutaredoxin, OsGRX6 affects hormone and nitrogen status in rice plants.
Fanata W.I., Lee K.H., Son B.H., Yoo J.Y., Harmoko R., Ko K.S., Ramasamy N.K., Kim K.H., Oh D.B., Jung H.S., Kim J.Y., Lee S.Y., Lee K.O.
Plant J. 2013  73(6)  966-79
N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa.
Tsai Y.C., Weir N.R., Hill K., Zhang W., Kim H.J., Shiu S.H., Schaller G.E., Kieber J.J.
Plant Physiol. 2012  158(4)  1666-84
Characterization of genes involved in cytokinin signaling and metabolism from rice.
Hirose,N., Makita,N., Kojima,M., Kamada-Nobusada,T. and Sakakibara,H.
Plant Cell Physiol. 2007  48(3)  523-539
Overexpression of a type-a response regulator alters rice morphology and cytokinin metabolism.
Pareek A, Singh A, Kumar M, Kushwaha HR, Lynn AM, Singla-Pareek SL.
Plant Physiol. 2006  142(2)  380-97
Whole-genome analysis of Oryza sativa reveals similar architecture of two-component signaling machinery with Arabidopsis.
Ito,Y. and Kurata,N.
Gene 2006  382  57-65
Identification and characterization of cytokinin-signalling gene families in rice.
Jain M,Tyagi AK,Khurana JP
BMC Plant Biol 2006  6  1
Molecular characterization and differential expression of cytokinin-responsive type-A response regulators in rice (Oryza sativa).
TextPresso Search Search textpresso for RR4 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0020058
Gene Ontology regulation of transcription( GO:0045449 )
two-component response regulator activity( GO:0000156 )
two-component signal transduction system (phosphorelay)( GO:0000160 )
response to cytokinin stimulus( GO:0009735 )
response to cold( GO:0009409 )
cytokinin mediated signaling( GO:0009736 )
response to auxin stimulus( GO:0009733 )
Trait Ontology cytokinin sensitivity( TO:0000167 )
cold tolerance( TO:0000303 )
auxin sensitivity( TO:0000163 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Jun 10, 2021