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Basic Information
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CGSNL Gene Symbol
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RR4
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Gene Symbol Synonym
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rr4, OsRR4, Rra3, OsRRA3
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CGSNL Gene Name
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A-TYPE RESPONSE REGULATOR 4
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Gene Name Synonym
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A-TYPE response regulator 4, Type A response regulator 4, A-type RR 3
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Protein Name
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A-TYPE RESPONSE REGULATOR 4
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Allele
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Chromosome No.
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1
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Explanation
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A-type RR. BR000258. AB249658. an osa-miR1439 target gene.
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Trait Class
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Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK101721
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MSU ID
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LOC_Os01g72330.1
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RAP ID
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Os01g0952500
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Saha S.R., Islam S.M.S., Itoh K.
Genes Genet. Syst. 2024
Identification of abiotic stress responsive genes: A genome wide analysis of the cytokinin response regulator gene family in rice.
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Li Y., Wang W., Hu C., Yang S., Ma C., Wu J., Wang Y., Xu Z., Li L., Huang Z., Zhu J., Jia X., Ye X., Yang Z., Sun Y., Liu H., Chen R.
Int J Mol Sci 2023 24(12)
Ectopic Expression of a Maize Gene <i>ZmDUF1645</i> in Rice Increases Grain Length and Yield, but Reduces Drought Stress Tolerance.
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Hu X., Yu P., Zhang Y., Gao Z., Sun B., Wu W., Deng C., Abbas A., Hong Y., Sun L., Liu Q., Xue P., Wang B., Zhan X., Cao L., Cheng S.
J. Exp. Bot. 2023 74(5) 1501-1516
Mutation of DEFECTIVE EMBRYO SAC1 results in a low seed-setting rate in rice by regulating embryo sac development.
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Mao C., He J., Liu L., Deng Q., Yao X., Liu C., Qiao Y., Li P., Ming F.
Plant Biotechnol. J. 2020 18(2) 429-442
OsNAC2 integrates auxin and cytokinin pathways to modulate rice root development.
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Xiao Y., Zhang J., Yu G., Lu X., Mei W., Deng H., Zhang G., Chen G., Chu C., Tong H., Tang W.
Front Plant Sci 2020 11 618560
Endoplasmic Reticulum-Localized PURINE PERMEASE1 Regulates plant height and grain weight by Modulating Cytokinin Distribution in Rice.
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Xiao Y., Liu D., Zhang G., Gao S., Liu L., Xu F., Che R., Wang Y., Tong H., Chu C.
J Integr Plant Biol 2018
Big Grain3, encoding a purine permease, regulates grain size via modulating cytokinin transport in rice.
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Song S., Li L., Li Y., Wang T., Fu X.
Molecular Breeding 2017 38
Overexpression of gene OsSUI1 affects floral organ development in rice (Oryza sativa L.)
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Tao J., Sun H., Gu P., Liang Z., Chen X., Lou J., Xu G., Zhang Y.
Plant Methods 2017 13 89
A sensitive synthetic reporter for visualizing cytokinin signaling output in rice.
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El-Kereamy A., Bi Y.M., Mahmood K., Ranathunge K., Yaish M.W., Nambara E., Rothstein S.J.
Front Plant Sci 2015 6 934
Overexpression of the CC-type glutaredoxin, OsGRX6 affects hormone and nitrogen status in rice plants.
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Hua L., Wang D.R., Tan L., Fu Y., Liu F., Xiao L., Zhu Z., Fu Q., Sun X., Gu P., Cai H., McCouch S.R., Sun C.
Plant Cell 2015 27(7) 1875-88
LABA1, a Domestication Gene Associated with Long, Barbed Awns in Wild Rice.
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Yang Y.W., Chen H.C., Jen W.F., Liu L.Y., Chang M.C.
PLoS ONE 2015 10(7) e0131391
Comparative Transcriptome Analysis of Shoots and Roots of TNG67 and TCN1 Rice Seedlings under Cold Stress and Following Subsequent Recovery: Insights into Metabolic Pathways, Phytohormones, and Transcription Factors.
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Fanata W.I., Lee K.H., Son B.H., Yoo J.Y., Harmoko R., Ko K.S., Ramasamy N.K., Kim K.H., Oh D.B., Jung H.S., Kim J.Y., Lee S.Y., Lee K.O.
Plant J. 2013 73(6) 966-79
N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa.
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Tsai Y.C., Weir N.R., Hill K., Zhang W., Kim H.J., Shiu S.H., Schaller G.E., Kieber J.J.
Plant Physiol. 2012 158(4) 1666-84
Characterization of genes involved in cytokinin signaling and metabolism from rice.
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Hirose,N., Makita,N., Kojima,M., Kamada-Nobusada,T. and Sakakibara,H.
Plant Cell Physiol. 2007 48(3) 523-539
Overexpression of a type-a response regulator alters rice morphology and cytokinin metabolism.
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Jain M,Tyagi AK,Khurana JP
BMC Plant Biol 2006 6 1
Molecular characterization and differential expression of cytokinin-responsive type-A response regulators in rice (Oryza sativa).
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Pareek A, Singh A, Kumar M, Kushwaha HR, Lynn AM, Singla-Pareek SL.
Plant Physiol. 2006 142(2) 380-97
Whole-genome analysis of Oryza sativa reveals similar architecture of two-component signaling machinery with Arabidopsis.
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Ito,Y. and Kurata,N.
Gene 2006 382 57-65
Identification and characterization of cytokinin-signalling gene families in rice.
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DB Reference
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Gramene ID
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GR:0020058
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Ontologies
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Gene Ontology
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nucleus( GO:0005634 )
response to alkalinity( GO:0010446 )
response to salt stress( GO:0009651 )
response to heat( GO:0009408 )
regulation of transcription( GO:0045449 )
two-component response regulator activity( GO:0000156 )
two-component signal transduction system (phosphorelay)( GO:0000160 )
response to cytokinin stimulus( GO:0009735 )
response to cold( GO:0009409 )
cytokinin mediated signaling( GO:0009736 )
response to auxin stimulus( GO:0009733 )
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Trait Ontology
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cytokinin sensitivity( TO:0000167 )
cold tolerance( TO:0000303 )
auxin sensitivity( TO:0000163 )
heat tolerance( TO:0000259 )
salt tolerance( TO:0006001 )
alkali sensitivity( TO:0000481 )
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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Oct 9, 2024
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Update info.