Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol RR2
Gene Symbol Synonym rr2, Osrr2, OsRR2, Rra10, OsRRA10
Gene Name Synonym A-TYPE response regulator 2, Type A response regulator 2, A-type RR 10
Chromosome No. 2
Explanation A-type RR. BR000312. AB249662.
Trait Class Vegetative organ - Root
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK070645
MSU ID LOC_Os02g35180.1
RAP ID Os02g0557800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Mei W., Chen W., Wang Y., Liu Z., Dong Y., Zhang G., Deng H., Liu X., Lu X., Wang F., Chen G., Tang W., Xiao Y.
Int J Mol Sci 2023  24(7) 
Exogenous Kinetin Modulates ROS Homeostasis to Affect heat tolerance in Rice Seedlings.
Cui J., Nishide N., Mashiguchi K., Kuroha K., Miya M., Sugimoto K., Itoh J.I., Yamaguchi S., Izawa T.
Nat Commun 2023  14(1)  3191
Fertilization controls tiller numbers via transcriptional regulation of a MAX1-like gene in rice cultivation.
Yu N., Liang Y., Wang Q., Peng X., He Z., Hou X.
Sci Rep 2022  12(1)  6736
Transcriptomic analysis of OsRUS1 overexpression rice lines with rapid and dynamic leaf rolling morphology.
Alfatih A., Zhang J., Song Y., Jan S.U., Zhang Z.S., Xia J.Q., Zhang Z.Y., Nazish T., Wu J., Zhao P.X., Xiang C.B.
Plant Commun 2022    100458
Nitrate-responsive OsMADS27 promotes salt tolerance in rice.
Xiao Y., Zhang J., Yu G., Lu X., Mei W., Deng H., Zhang G., Chen G., Chu C., Tong H., Tang W.
Front Plant Sci 2020  11  618560
Endoplasmic Reticulum-Localized PURINE PERMEASE1 Regulates plant height and grain weight by Modulating Cytokinin Distribution in Rice.
Duan J., Yu H., Yuan K., Liao Z., Meng X., Jing Y., Liu G., Chu J., Li J.
Proc. Natl. Acad. Sci. U.S.A. 2019  116(28)  14319-14324
Strigolactone promotes cytokinin degradation through transcriptional activation of <i>CYTOKININ OXIDASE/DEHYDROGENASE 9</i> in rice.
Xiao Y., Liu D., Zhang G., Gao S., Liu L., Xu F., Che R., Wang Y., Tong H., Chu C.
J Integr Plant Biol 2018   
Big Grain3, encoding a purine permease, regulates grain size via modulating cytokinin transport in rice.
Phule A.S., Barbadikar K.M., Madhav M.S., Senguttuvel P., Babu MBBP., Ananda Kumar P.
3 Biotech 2018  8(9)  383
Genes encoding membrane proteins showed stable expression in rice under aerobic condition: novel set of reference genes for expression studies.
Tao J., Sun H., Gu P., Liang Z., Chen X., Lou J., Xu G., Zhang Y.
Plant Methods 2017  13  89
A sensitive synthetic reporter for visualizing cytokinin signaling output in rice.
Song S., Li L., Li Y., Wang T., Fu X.
Molecular Breeding 2017  38 
Overexpression of gene OsSUI1 affects floral organ development in rice (Oryza sativa L.)
Li X., Yang D.L., Sun L., Li Q., Mao B., He Z.
Plant Physiol. 2016  172(1)  546-58
The Systemic Acquired Resistance Regulator OsNPR1 Attenuates Growth by Repressing Auxin Signaling through Promoting IAA-Amido Synthase Expression.
El-Kereamy A., Bi Y.M., Mahmood K., Ranathunge K., Yaish M.W., Nambara E., Rothstein S.J.
Front Plant Sci 2015  6  934
Overexpression of the CC-type glutaredoxin, OsGRX6 affects hormone and nitrogen status in rice plants.
Hua L., Wang D.R., Tan L., Fu Y., Liu F., Xiao L., Zhu Z., Fu Q., Sun X., Gu P., Cai H., McCouch S.R., Sun C.
Plant Cell 2015  27(7)  1875-88
LABA1, a Domestication Gene Associated with Long, Barbed Awns in Wild Rice.
Zhao Y., Cheng S., Song Y., Huang Y., Zhou S., Liu X., Zhou D.X.
Plant Cell 2015   
The Interaction between Rice ERF3 and WOX11 Promotes crown root Development by Regulating Gene Expression Involved in Cytokinin Signaling.
Gao S., Fang J., Xu F., Wang W., Sun X., Chu J., Cai B., Feng Y., Chu C.
Plant Physiol. 2014  165(3)  1035-1046
CYTOKININ OXIDASE/DEHYDROGENASE4 Integrates Cytokinin and Auxin Signaling to Control Rice crown root Formation.
Fanata W.I., Lee K.H., Son B.H., Yoo J.Y., Harmoko R., Ko K.S., Ramasamy N.K., Kim K.H., Oh D.B., Jung H.S., Kim J.Y., Lee S.Y., Lee K.O.
Plant J. 2013  73(6)  966-79
N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa.
Tsai Y.C., Weir N.R., Hill K., Zhang W., Kim H.J., Shiu S.H., Schaller G.E., Kieber J.J.
Plant Physiol. 2012  158(4)  1666-84
Characterization of genes involved in cytokinin signaling and metabolism from rice.
Kitomi Y. , Ito H. , Hobo T. , Aya K. , Kitano H. , Inukai Y.
Plant J. 2011  67(3)  472-84
The auxin responsive AP2/ERF transcription factor CROWN ROOTLESS5 is involved in crown root initiation in rice through the induction of OsRR1, a type-A response regulator of cytokinin signaling.
Zhao Y,Hu Y,Dai M,Huang L,Zhou DX
Plant Cell 2009  21  736-48
The WUSCHEL-related homeobox gene WOX11 is required to activate shoot-borne crown root development in rice.
Hirose,N., Makita,N., Kojima,M., Kamada-Nobusada,T. and Sakakibara,H.
Plant Cell Physiol. 2007  48(3)  523-539
Overexpression of a type-a response regulator alters rice morphology and cytokinin metabolism.
Jain M,Tyagi AK,Khurana JP
BMC Plant Biol 2006  6  1
Molecular characterization and differential expression of cytokinin-responsive type-A response regulators in rice (Oryza sativa).
Pareek A, Singh A, Kumar M, Kushwaha HR, Lynn AM, Singla-Pareek SL.
Plant Physiol. 2006  142(2)  380-97
Whole-genome analysis of Oryza sativa reveals similar architecture of two-component signaling machinery with Arabidopsis.
Ito,Y. and Kurata,N.
Gene 2006  382  57-65
Identification and characterization of cytokinin-signalling gene families in rice.
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DB Reference
Gramene ID GR:0020056
Gene Ontology response to heat( GO:0009408 )
regulation of transcription( GO:0045449 )
two-component response regulator activity( GO:0000156 )
two-component signal transduction system (phosphorelay)( GO:0000160 )
response to cytokinin stimulus( GO:0009735 )
root development( GO:0048364 )
cytokinin mediated signaling( GO:0009736 )
response to auxin stimulus( GO:0009733 )
response to oxygen levels( GO:0070482 )
Trait Ontology root development trait( TO:0000656 )
cytokinin sensitivity( TO:0000167 )
auxin sensitivity( TO:0000163 )
oxygen sensitivity( TO:0000015 )
heat tolerance( TO:0000259 )
Plant Ontology crown root primordium formation stage( PO:0007504 )
Related Strains
Phenotype images
Last updated
Oct 10, 2023