Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol COW1
Gene Symbol Synonym OsCOW1, oscow1, OsYUC8, YUC8, NAL7, OsNAL7, OsYUCCA8, YUCCA8, FMO, OsFMO(t), REIN7, YUC8/REIN7
Gene Name Synonym CONSTITUTIVELY WILTED1, Constitutively wilted 1, NARROW LEAF7, NARROW LEAF 7, YUCCA-LIKE GENE 8, flavin monooxygenase, rice ethylene-insensitive 7
Protein Name
Allele cow1, cow1-1, cow1-2, nal7, rein7, rein7-1, rein7-2, osyuc8-2, Osyuc8
Chromosome No. 3
Explanation AB354302, AB354301. HQ443270, HQ443271. a member of the rice YUCCA gene family. GO:2000024: regulation of leaf development. TO:0020106: Indole-3-acetic acid content. an orthologue of AtYUCCA. GO:0090351: seedling development. TO:0006064: rolled leaf.
Trait Class Vegetative organ - Leaf
Tolerance and resistance - Disease resistance
Vegetative organ - Root
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK072466
MSU ID LOC_Os03g06654.1
RAP ID Os03g0162000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Zhou L., Chen S., Cai M., Cui S., Ren Y., Zhang X., Liu T., Zhou C., Jin X., Zhang L., Wu M., Zhang S., Cheng Z., Zhang X., Lei C., Lin Q., Guo X., Wang J., Zhao Z., Jiang L., Zhu S., Wan J.
J Integr Plant Biol 2023   
ESCRT-III component OsSNF7.2 modulates leaf rolling by trafficking and endosomal degradation of auxin biosynthetic enzyme OsYUC8 in rice.
Huang G., Kilic A., Karady M., Zhang J., Mehra P., Song X., Sturrock C.J., Zhu W., Qin H., Hartman S., Schneider H.M., Bhosale R., Dodd I.C., Sharp R.E., Huang R., Mooney S.J., Liang W., Bennett M.J., Zhang D., Pandey B.K.
Proc. Natl. Acad. Sci. U.S.A. 2022  119(30)  e2201072119
Ethylene inhibits rice root elongation in compacted soil via ABA- and auxin-mediated mechanisms.
Zhang L., Feng P., Deng Y., Yin W., Wan Y., Lei T., He G., Wang N.
Rice (N Y) 2021  14(1)  13
Decreased Vascular Bundle 1 affects mitochondrial and plant development in rice.
Malik N., Ranjan R., Parida S.K., Agarwal P., Tyagi A.K.
Plant J. 2020  101(6)  1411-1429
Mediator subunit OsMED14_1 plays an important role in rice development.
Qin Q., Li G., Jin L., Huang Y., Wang Y., Wei C., Xu Z., Yang Z., Wang H., Li Y.
PLoS Pathog. 2020  16(12)  e1009118
Auxin response factors (ARFs) differentially regulate rice antiviral immune response against rice dwarf virus.
Wang H., Shi Y., Zhang X., Xu X., Wu J.L.
Int J Mol Sci 2020  21(4) 
Characterization of a Novel Rice Dynamic Narrow-rolled leaf Mutant with Deficiencies in Aromatic Amino Acids.
Liu Q., Ting-Ting Chen, Dong-Wang Xiao, Shu-Man Zhao, Ji-Shan Lin, Wang T., Yan-Jie Li, Bing-Kai Hou
Rice (N Y) 2019  12(1)  92
OsIAGT1 Is a Glucosyltransferase Gene Involved in the Glucose Conjugation of Auxins in Rice.
Xu P., Ali A., Han B., Wu X.
Front Plant Sci 2018  9  1528
Current Advances in Molecular Basis and Mechanisms Regulating Leaf Morphology in Rice.
Qin H., Zhang Z., Wang J., Chen X., Wei P., Huang R.
PLoS Genet. 2017  13(8)  e1006955
The activation of OsEIL1 on YUC8 transcription and auxin biosynthesis is required for ethylene-inhibited root elongation in rice early seedling development.
Yang S.Q., Li W.Q., Miao H., Gan P.F., Qiao L., Chang Y.L., Shi C.H., Chen K.M.
Rice (N Y) 2016  9(1)  37
rel2, A Gene Encoding An Unknown Function Protein which Contains DUF630 and DUF632 Domains Controls leaf rolling in Rice.
Abu-Zaitoon YM.
Appl. Biochem. Biotechnol. 2014  172(5)  2480-95
Phylogenetic analysis of putative genes involved in the tryptophan-dependent pathway of auxin biosynthesis in rice.
Yi J., Liu L., Cao Y., Li J., Mei M.
J. Genet. 2013  92(3)  471-80
Cloning, characterization and expression of OsFMO(t) in rice encoding a flavin monooxygenase.
Fujino,K., Matsuda,Y., Ozawa,K., Nishimura,T., Koshiba,T., Fraaije,M.W. and Sekiguchi,H.
Mol. Genet. Genomics 2008  279(5)  499-507
NARROW LEAF 7 controls leaf shape mediated by auxin in rice
Woo YM, Park HJ, Su'udi M, Yang JI, Park JJ, Back K, Park YM, An G
Plant Mol. Biol. 2007  65(1-2)  125-36
Constitutively wilted 1, a member of the rice YUCCA gene family, is required for maintaining water homeostasis and an appropriate root to shoot ratio.
TextPresso Search Search textpresso for COW1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology leaf development( GO:0048366 )
ethylene mediated signaling pathway( GO:0009873 )
root development( GO:0048364 )
defense response to virus( GO:0051607 )
auxin mediated signaling pathway( GO:0009734 )
NADP or NADPH binding( GO:0050661 )
FAD binding( GO:0050660 )
cotyledon development( GO:0048825 )
inflorescence development( GO:0010229 )
positive regulation of flower development( GO:0009911 )
multicellular organismal development( GO:0007275 )
cytosol( GO:0005829 )
water homeostasis( GO:0030104 )
auxin biosynthetic process( GO:0009851 )
Golgi membrane( GO:0000139 )
flavin-containing monooxygenase activity( GO:0004499 )
nucleoplasm( GO:0005654 )
indolepyruvate decarboxylase activity( GO:0047434 )
regulation of anatomical structure morphogenesis( GO:0022603 )
Trait Ontology leaf shape( TO:0000492 )
viral disease resistance( TO:0000148 )
root length( TO:0000227 )
root development trait( TO:0000656 )
leaf development trait( TO:0000655 )
Plant Ontology root tip( PO:0000025 )
leaf( PO:0025034 )
stem( PO:0009047 )
stem node( PO:0020141 )
root development stage( PO:0007520 )
Related Strains
Phenotype images
Last updated
May 29, 2023