Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CHT9
Gene Symbol Synonym Cht9, OsCht9, Cht1, OsChi19A, Chi19A
CGSNL Gene Name CHITINASE 9
Gene Name Synonym Chitinase9, Chitinase 9, Pathogenesis related (PR)-3 chitinase 9, Chitinase-9
Protein Name CHITINASE 9
Allele
Chromosome No. 5
Explanation PR-3 chitinase, pathogenesis related 3 chitinase. Q688M5. BGIOSGA019833 (indica). EC=3.2.1.14. GH19 chitinase family. OsChi19A in Shobade et al. 2024.
Trait Class Biochemical character
Tolerance and resistance - Insect resistance
Expression
Sequence/Locus
cDNA Accession No. Q688M5
MSU ID LOC_Os05g33140.1
RAP ID Os05g0399400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Shobade S.O., Zabotina O.A., Nilsen-Hamilton M.
Front Plant Sci 2024  15  1344142
Plant root associated chitinases: structures and functions.
Dash M., Somvanshi V.S., Budhwar R., Godwin J., Shukla R.N., Rao U.
Planta 2021  253(5)  108
A rice root-knot nematode Meloidogyne graminicola-resistant mutant rice line shows early expression of plant-defence genes.
Nakazaki T, Tsukiyama T, Okumoto Y, Kageyama D, Naito K, Inouye K, Tanisaka T.
Genome 2006  49(6)  619-30
Distribution, structure, organ-specific expression, and phylogenic analysis of the pathogenesis-related protein-3 chitinase gene family in rice (Oryza sativa L.).
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to nematode( GO:0009624 )
defense response to nematode( GO:0002215 )
defense response( GO:0006952 )
cytoplasmic membrane-bounded vesicle( GO:0016023 )
chitin binding( GO:0008061 )
chitinase activity( GO:0004568 )
cell wall macromolecule catabolic process( GO:0016998 )
chitin catabolic process( GO:0006032 )
Trait Ontology nematode damage resistance( TO:0000384 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 25, 2024

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