Gene - Detail
Detail of Gene
Basic Information | |
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CGSNL Gene Symbol | CHT9 |
Gene Symbol Synonym | Cht9, OsCht9, Cht1, OsChi19A, Chi19A |
CGSNL Gene Name | CHITINASE 9 |
Gene Name Synonym | Chitinase9, Chitinase 9, Pathogenesis related (PR)-3 chitinase 9, Chitinase-9 |
Protein Name | CHITINASE 9 |
Allele | |
Chromosome No. | 5 |
Explanation | PR-3 chitinase, pathogenesis related 3 chitinase. Q688M5. BGIOSGA019833 (indica). EC=3.2.1.14. GH19 chitinase family. OsChi19A in Shobade et al. 2024. |
Trait Class |
Biochemical character
Tolerance and resistance - Insect resistance |
Expression | |
Sequence/Locus | |
cDNA Accession No. |
Q688M5
|
MSU ID |
LOC_Os05g33140.1
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RAP ID |
Os05g0399400 |
Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
INSD Accession List (Test version) |
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Map | |
Locate(cM) | |
Link map | Classical linkage map |
References | |
Shobade S.O., Zabotina O.A., Nilsen-Hamilton M.
Front Plant Sci 2024 15 1344142 Plant root associated chitinases: structures and functions.
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Dash M., Somvanshi V.S., Budhwar R., Godwin J., Shukla R.N., Rao U.
Planta 2021 253(5) 108 A rice root-knot nematode Meloidogyne graminicola-resistant mutant rice line shows early expression of plant-defence genes.
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Nakazaki T, Tsukiyama T, Okumoto Y, Kageyama D, Naito K, Inouye K, Tanisaka T.
Genome 2006 49(6) 619-30 Distribution, structure, organ-specific expression, and phylogenic analysis of the pathogenesis-related protein-3 chitinase gene family in rice (Oryza sativa L.).
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DB Reference | |
Gramene ID | - |
Ontologies | |
Gene Ontology |
response to nematode( GO:0009624 )
defense response to nematode( GO:0002215 ) defense response( GO:0006952 ) cytoplasmic membrane-bounded vesicle( GO:0016023 ) chitin binding( GO:0008061 ) chitinase activity( GO:0004568 ) cell wall macromolecule catabolic process( GO:0016998 ) chitin catabolic process( GO:0006032 ) |
Trait Ontology |
nematode damage resistance( TO:0000384 )
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Plant Ontology | - |
Related Strains | |
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Phenotype images | |
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Last updated | |
Jun 25, 2024 |