Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
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| CGSNL Gene Symbol | CHT5 |
| Gene Symbol Synonym | Cht5, OsChia4a, OsChitIVa, Chia4a, ChitIVa, CHIT3, OsCHIT3 |
| CGSNL Gene Name | CHITINASE 5 |
| Gene Name Synonym | Chitinase5, Chitinase 5, Pathogenesis related (PR)-3 chitinase 5, Pathogenesis related-3 chitinase 5, PR-3 chitinase 5, Class IV chitinase a, Chitinase IVa, Endochitinase A |
| Protein Name | CHITINASE 5 |
| Allele | |
| Chromosome No. | 4 |
| Explanation | PR-3 chitinase, pathogenesis related 3 chitinase. EC=3.2.1.14 Q7Y1Z0. EU850802 (Oryza grandiglumis PR-3 (OgChitIVa)). BAC76691. Endochitinase A in Sudo et al. 2008. LOC_Os04g41680. CHIT3 in Liu et al. 2018. |
| Trait Class |
Biochemical character
Tolerance and resistance - Disease resistance Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK071013
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| MSU ID |
LOC_Os04g41680.1
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| RAP ID |
Os04g0494100 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
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INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Liu Q., Li X., Yan S., Yu T., Yang J., Dong J., Zhang S., Zhao J., Yang T., Mao X., Zhu X., Liu B.
BMC Plant Biol. 2018 18(1) 257 OsWRKY67 positively regulates blast and bacteria blight resistance by direct activation of PR genes in rice.
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Park,J.-H., Chung,E.-S., Shin,S.-H., Jeon,E.-H., Kim,M.-J., Lee,H.-Y., Jeung,J.-U., Hyung,N.-I., Lee,J.-H. and Chung,Y.-S.
Plant Biotechnol Rep 2009 3(2) 147-155 Enhanced fungal resistance in Arabidopsis expressing wild rice PR-3 (OgChitIVa) encoding chitinase class IV
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Sudo E., Itouga M., Kayo Yoshida-Hatanaka, Ono Y., Sakakibara H.
J. Exp. Bot. 2008 59(12) 3465-74 Gene expression and sensitivity in response to copper stress in rice leaves.
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Nakazaki T, Tsukiyama T, Okumoto Y, Kageyama D, Naito K, Inouye K, Tanisaka T.
Genome 2006 49(6) 619-30 Distribution, structure, organ-specific expression, and phylogenic analysis of the pathogenesis-related protein-3 chitinase gene family in rice (Oryza sativa L.).
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| TextPresso Search | Search textpresso for CHT5 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | GR:0060137 |
| Ontologies | |
| Gene Ontology |
chitinase activity( GO:0004568 )
chitin catabolic process( GO:0006032 ) defense response( GO:0006952 ) chitin binding( GO:0008061 ) cell wall macromolecule catabolic process( GO:0016998 ) response to copper ion( GO:0046688 ) |
| Trait Ontology |
copper sensitivity( TO:0000021 )
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| Plant Ontology | - |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| May 26, 2019 | |
