Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol SPL5
Gene Symbol Synonym spl5(bl6,spl5-1), bl6, spl5, SF3b3
CGSNL Gene Name SPOTTED LEAF 5
Gene Name Synonym spotted leaf5, spotted leaf 5, spotted leaf-5, splicing factor 3b subunit 3
Protein Name
Allele spl5-2, spl5
Chromosome No. 7
Explanation Relatively small reddish brown spots scattering over the whole surface of leaves. They appear from tillering stage to heading time. The phenotypes of spl3, spl5 and spl7 are similar, being difficult to distingush each other. Hypersensitivity to pathogens brings in resistance to rice blast and bacterial blight. PO:0009025; leaf. GRO:0007048; 04-stem elongation stage ; GRO:0007148; 05-booting stage ; GRO:0007049; 03-tillering stage ; GRO:0007044; 06-heading stage. KC128660.
Trait Class Tolerance and resistance - Lesion mimic
Expression
Sequence/Locus
cDNA Accession No. -
RAP ID Os07g0203700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
-
Map
Locate(cM) 31.0
Link map Classical linkage map
References
Chen X.a, Fu S.a, Zhang P.a, Gu Z.a, Liu J.a, Qian Q.b, Ma B.a
Rice (N Y) 2013  6  1
Proteomic analysis of a disease-resistance-enhanced lesion mimic mutant spotted leaf 5 in rice
Ma,B. and Chen,X.
Mol. Breed. 2012  30(2)  939-949
SPL5, a cell death and defense-related gene, encodes a putative splicing factor 3b subunit 3 (SF3b3) in rice
Mizobuchi, R., H. Hirabayashi, R. Kaji, Y. Nishizawa, A. Yoshimura, H. Satoh, T. Ogawa, M. Okamoto
Plant Sci. 2002  163(2)  345-353
Isolation and characterization of rice lesion-mimic mutants with enhanced resistance to rice blast and bacterial blight.
Ideta, O., A. Yoshimura, M. Ashikari and N. Iwata
RGN 1994  11  116-117.
Integration of conventional and RFLP linkage maps in rice.III. Choromosomes 5, 7, 8 and 12.
Satoh, H. and N. Iwata
Japan. J. Breed. 1990  40(Suppl. 2)  268-269.
Linkage analysis in rice. On three mutant loci for endosperm properties, ge(giant embryo), du-4(dull endosperm-4) and flo-1(floury endosperm-1).
Iwata, N., H. Satoh and T. Omura
Japan. J. Breed. 1981  31(Suppl. 1)  66-67.
Linkage analysis by use of trisomics in rice (Oryza sativa L. ). IV. Linkage groups locating on chromosomes 2 and 10.
Iwata, N., T. Omura and H. Satoh
J. Fac. Agr. Kyushu Univ. 1978  22  243-251.
Linkage studies in rice (Oryza sativa L.). On some mutants for physiological leaf spots.
Iwata, N. and T. Omura
J. Fac. Agr. Kyushu Univ. 1977  21  117-127.
Linkage studies in rice (Oryza sativa L.). On some mutants derived from chronic gamma irradiation.
TextPresso Search Search textpresso for SPL5 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060906
Ontologies
Gene Ontology defense response( GO:0006952 )
nucleic acid binding( GO:0003676 )
nucleus( GO:0005634 )
Trait Ontology variegated leaf( TO:0000069 )
mimic response( TO:0000063 )
Plant Ontology vascular leaf( PO:0009025 )
Related Strains
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Phenotype images
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Photo from A. Yoshimura
Last updated
2014-04-28 14:30:08.541


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