Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol G1
Gene Symbol Synonym g1 (lng), lng, g1, ELE, OsG1, G1/ELE, LSL2, OsLSL2
Gene Name Synonym long sterile lemmas1, long sterile lemmas 1, long sterile lemmas-1, elongated empty glume, long sterile lemma/glume1, long sterile lemma 2
Protein Name
Allele g1-1, g1-2, g1-3, g1-4, ele, g1, g1-ele, g1-6, osg1-1, osg1-2, osg1-3, osg1-4, osg1-5, osg1-6, lsl2
Chromosome No. 7
Explanation Steril lemmas grow long as same as lemma. Q8GVZ6. GRO:0007044; 06-heading stage ; GRO:0007042; 08-dough stage ; GRO:0007045; 09-mature grain stage ; GRO:0007046; 07-milk stage. G1 is a member of a plant-specific gene family that encodes proteins with ALOG domain. AB512480(OsG1), AB512486(OgG1-1,W0613), AB512487(OgG1-2, W0613), AB512488(OgG1-1, W1194), AB512489(OgG1-2, W1194). FJ502130. DUF640 domain protein. TO:0000869: glume anatomy and morphology trait. GO:0090698: post-embryonic plant morphogenesis. PO:0030123: panicle inflorescence. LSL2 in Yang et al. 2020. TO:0000869: glume morphology trait.
Trait Class Seed - Morphological traits - Grain shape
Seed - Physiological traits - Dormancy
Reproductive organ - Spikelet, flower, glume, awn
cDNA Accession No. AB512480
MSU ID LOC_Os07g04670.1
RAP ID Os07g0139300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Locate(cM) 6.0
Link map Classical linkage map
Yang D., He N., Zheng X., Zhen Y., Xie Z., Cheng C., Huang F.
BMC Plant Biol. 2020  20(1)  561
Cloning of long sterile lemma (lsl2), a single recessive gene that regulates spike germination in rice (Oryza sativa L.).
Zhuang H., Hong-Lei Wang, Zhang T., Xiao-Qin Zeng, Chen H., Zhong-Wei Wang, Zhang J., Zheng H., Tang J., Ying-Hua Ling, Zheng-Lin Yang, Guang-Hua He, Yun-Feng Li
Plant Cell 2020  32(2)  392-413
<i>NONSTOP GLUMES1</i> Encodes a C2H2 Zinc Finger Protein That Regulates Spikelet Development in Rice.
Li N., Wang Y., Lu J., Liu C.
International Journal of Genomics 2019  2019  2146391
Genome-Wide Identification and Characterization of the ALOG Domain Genes in Rice.
Liu M., Li H., Su Y., Li W., Shi C.
Front Plant Sci 2016  7  1006
g1/ELE Functions in the Development of Rice Lemmas in Addition to Determining Identities of Empty Glumes.
Zhang B., Wu S., Zhang Y., Xu T., Guo F., Tang H., Li X., Wang P., Qian W., Xue Y.
PLoS Genet. 2016  12(7)  e1006152
A High Temperature-Dependent Mitochondrial Lipase EXTRA GLUME1 Promotes Floral Phenotypic Robustness against Temperature Fluctuation in Rice (Oryza sativa L.).
Sato D.S.a, Ohmori Y.a b, Nagashima H.a, Toriba T.a c, Hirano H.Y.a
Genes and Genetic Systems 2014  89  61-69
A role for TRIANGULAR HULL1 in fine-tuning spikelet morphogenesis in rice
Ren D., Li Y., Zhao F., Sang X., Shi J., Wang N., Guo S., Ling Y., Zhang C., Yang Z., He G.
Plant Physiol. 2013  162(2)  872-84
MULTI-FLORET SPIKELET1, which encodes an AP2/ERF protein, determines spikelet meristem fate and sterile lemma identity in rice.
Ma X.a, Cheng Z.a, Wu F.a, Jin M.a, Zhang L.b, Zhou F.b, Wang J.a, Zhou K.b, Ma J.a, Lin Q.a, Lei C.a, Wan J.a b
Plant Molecular Biology Reporter 2013  31  98-108
BEAK LIKE SPIKELET1 is Required for Lateral Development of Lemma and Palea in Rice
Hong,L., Qian,Q., Zhu,K., Tang,D., Huang,Z., Gao,L., Li,M., Gu,M. and Cheng,Z.
J Genet Genomics 2010  37(2)  101-115
ELE restrains empty glumes from developing into lemmas
Yoshida A,Suzaki T,Tanaka W,Hirano HY
Proc. Natl. Acad. Sci. U.S.A. 2009  106(47)  20103-8
The homeotic gene long sterile lemma (G1) specifies sterile lemma identity in the rice spikelet.
Eiguchi, M. and Y. Sano
RGN 1995  12  187-189.
Evolutionary significance of chromosome 7 in an annual type of wild rice.
Ideta, O., A. Yoshimura, M. Ashikari and N. Iwata
RGN 1994  11  116-117.
Integration of conventional and RFLP linkage maps in rice.III. Choromosomes 5, 7, 8 and 12.
Ideta, O., A. Yoshimura, T. Matsumoto, H. Tsunematsu, T. Mikoda, H. Satoh and N. Iwata
Japan. J. Breed. 1992  42(Suppl. 2)  126-127.
Integration of conventional and RFLP linkage maps in rice.III. On the arrangement of some marker genes and RELP markers.
Takamure, I. and T. Kinoshita
RGN 1992  9  85-88.
Modification of glume characters due to genic interactions and environmental conditions.
Satoh, H. and N. Iwata
Japan. J. Breed. 1990  40(Suppl. 2)  268-269.
Linkage analysis in rice. On three mutant loci for endosperm properties, ge(giant embryo), du-4(dull endosperm-4) and flo-1(floury endosperm-1).
Kinoshita, T.
In Biology of Rice. S. Tsunoda and N. Takahashi eds. JSSP/Elsevier, Tokyo. 1984    187-274.
Gene analysis and linkage map.
Iwata, N., H. Satoh and T. Omura
Japan. J. Breed. 1981  31(Suppl. 1)  66-67.
Linkage analysis by use of trisomics in rice (Oryza sativa L. ). IV. Linkage groups locating on chromosomes 2 and 10.
Jodon, N.E.
In Proceed. Symp. Rice Genet. Cytogenet., Internatl. Rice Res. Inst. (1963). Elsevier, Amsterdam. 1964    193-204.
Gentetic segregation and linkage, important phases of rice research.
Nagao, S. and M. Takahashi
J. Fac. Agr. Hokkaido Univ. 1963  53(1)  72-130.
Trial construction of twelve linkage groups in Japanese rice. (Genetical studies on rice plant, XXVII).
Nagao, S.
Adv. Genet. 1951  4  181-212.
Genic analysis and linkage relationship of characters in rice.
TextPresso Search Search textpresso for G1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060340
Gene Ontology regulation of seed germination( GO:0010029 )
regulation of flower development( GO:0009909 )
flower development( GO:0009908 )
nucleus( GO:0005634 )
DNA binding( GO:0003677 )
regulation of transcription, DNA-dependent( GO:0006355 )
mRNA transcription( GO:0009299 )
response to light stimulus( GO:0009416 )
floral organ formation( GO:0048449 )
Trait Ontology sterile lemma length( TO:0000240 )
sterile lemma shape( TO:0002726 )
flower development trait( TO:0000622 )
glume length( TO:0020033 )
lemma and palea anatomy and morphology trait( TO:0000079 )
germination rate( TO:0000430 )
spikelet anatomy and morphology trait( TO:0000657 )
grain size( TO:0000397 )
seed size( TO:0000391 )
Plant Ontology lemma( PO:0009037 )
palea( PO:0009038 )
glume( PO:0009039 )
flower development stage( PO:0007615 )
Related Strains
Stocks for Genes 1
Phenotype images
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Photo from A. Yoshimura
Last updated
Jun 7, 2021