Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol SSIVB
Gene Symbol Synonym OsSSIVb, SSIV-2, OsSSIV-2, SSIVb, SSIV-2
CGSNL Gene Name SOLUBLE STARCH SYNTHASE IVB
Gene Name Synonym SOLUBLE STARCH SYNTHASE IV-2
Protein Name SOLUBLE STARCH SYNTHASE IVB
Allele
Chromosome No. 5
Explanation AY373258, AY100471. AY224560.
Trait Class Seed - Physiological traits - Storage substances
Seed - Morphological traits - Endosperm
Expression
Sequence/Locus
cDNA Accession No. AK067577
MSU ID LOC_Os05g45720.1
LOC_Os05g45720.2
LOC_Os05g45720.3
LOC_Os05g45720.4
RAP ID Os05g0533600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Park J.R., Kim E.G., Jang Y.H., Kim K.M.
BMC Plant Biol. 2021  21(1)  263
Screening and identification of genes affecting grain quality and spikelet fertility during high-temperature treatment in grain filling stage of rice.
Zhang H., Jang S.G., Lar S.M., Lee A.R., Cao F.Y., Seo J., Kwon S.W.
Plants (Basel) 2021  10(6) 
Genome-Wide Identification and Genetic Variations of the starch synthase Gene Family in Rice.
Jiang L., Zhong H., Jiang X., Zhang J., Huang R., Liao F., Deng Y., Liu Q., Huang Y., Wang H., Tao Y., Zheng J.
Front Plant Sci 2021  12  814928
Identification and Pleiotropic Effect Analysis of <i>GSE5</i> on Rice Chalkiness and grain shape.
Baysal C., He W., Drapal M., Villorbina G., Medina V., Capell T., Khush G.S., Zhu C., Fraser P.D., Christou P.
Proc. Natl. Acad. Sci. U.S.A. 2020  117(42)  26503-26512
Inactivation of rice starch branching enzyme IIb triggers broad and unexpected changes in metabolism by transcriptional reprogramming.
Chen C., He B., Liu X., Ma X., Liu Y., Yao H.Y., Zhang P., Yin J., Wei X., Koh H.J., Yang C., Xue H.W., Fang Z., Qiao Y.
Plant Biotechnol. J. 2019   
Pyrophosphate-fructose 6-phosphate 1-phosphotransferase (PFP1) regulates starch biosynthesis and seed development via heterotetramer formation in rice (Oryza sativa L.).
Long W., Wang Y., Zhu S., Jing W., Wang Y., Ren Y., Tian Y., Liu S., Liu X., Chen L., Wang D., Zhong M., Zhang Y., Hu T., Zhu J., Hao Y., Zhu X., Zhang W., Wang C., Zhang W., Wan J.
Plant Physiol. 2018  177(2)  698-712
FLOURY shrunken endosperm1 Connects Phospholipid Metabolism and Amyloplast Development in Rice.
Yun M.S. , Umemoto T. , Kawagoe Y.
Plant Cell Physiol. 2011  52(6)  1068-82
Rice debranching enzyme isoamylase3 facilitates starch metabolism and affects plastid morphogenesis.
Yan CJ,Tian ZX,Fang YW,Yang YC,Li J,Zeng SY,Gu SL,Xu CW,Tang SZ,Gu MH
Theor. Appl. Genet. 2011  122(1)  63-76
Genetic analysis of starch paste viscosity parameters in glutinous rice (Oryza sativa L.).
Tian,Z., Qian,Q., Liu,Q., Yan,M., Liu,X., Yan,C., Liu,G., Gao,Z., Tang,S., Zeng,D., Wang,Y., Yu,J., Gu,M. and Li,J.
Proc. Natl. Acad. Sci. U.S.A. 2009  106(51)  21760-5
Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities
Ryoo N, Yu C, Park CS, Baik MY, Park IM, Cho MH, Bhoo SH, An G, Hahn TR, Jeon JS.
Plant Cell Rep. 2007  26(7)  1083-95
Knockout of a starch synthase gene OsSSIIIa/Flo5 causes white-core floury endosperm in rice (Oryza sativa L.).
Dian,W., Jiang,H. and Wu,P.
J. Exp. Bot. 2005  56(412)  623-632
Evolution and expression analysis of starch synthase III and IV in rice.
Hirose T, Terao T.
Planta. 2004  220(1)  9-16
A comprehensive expression analysis of the starch synthase gene family in rice (Oryza sativa L.).
Cooper,B., Hutchison,D., Park,S., Guimil,S., Luginbuhl,P., Ellero,C., Goff,S.A. and Glazebrook,J.
Plant Mol. Biol. 2003  53(3)  273-279
Identification of rice (Oryza sativa) proteins linked to the cyclin-mediated regulation of the cell cycle.
TextPresso Search Search textpresso for SSIVB ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology endosperm development( GO:0009960 )
amyloplast( GO:0009501 )
starch biosynthetic process( GO:0019252 )
chloroplast( GO:0009507 )
glycogen biosynthetic process( GO:0005978 )
starch synthase activity( GO:0009011 )
Trait Ontology -
Plant Ontology endosperm( PO:0009089 )
endosperm development stage( PO:0007633 )
leaf( PO:0025034 )
Related Strains
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Phenotype images
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Last updated
Jul 19, 2022


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