Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol SSIIB
Gene Symbol Synonym OsSSIIb, OsSSII-2, SSII-2, SS2, OsSSSIIb, SS2b
CGSNL Gene Name SOLUBLE STARCH SYNTHASE IIB
Gene Name Synonym Starch synthase-IIb, starch synthase IIb, "Soluble starch synthase 2-2, chloroplastic/amyloplastic", Soluble starch synthase II-2, Starch synthase isoform zSTSII-2
Protein Name SOLUBLE STARCH SYNTHASE IIB
Allele
Chromosome No. 2
Explanation EC=2.4.1.21 Q6Z2T8. AF395537, AJ308110.
Trait Class Seed - Physiological traits - Storage substances
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK066446
MSU ID LOC_Os02g51070.1
RAP ID Os02g0744700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Liao Y., Ali A., Xue Z., Zhou X., Ye W., Guo D., Liao Y., Jiang P., Wu T., Zhang H., Xu P., Chen X., Zhou H., Liu Y., Wang W., Wu X.
Int J Mol Sci 2022  23(7) 
Disruption of <i>LLM9428</i>/<i>OsCATC</i> Represses Starch Metabolism and Confers Enhanced Blast Resistance in Rice.
Liu C., Ma T., Yuan D., Zhou Y., Long Y., Li Z., Dong Z., Duan M., Yu D., Jing Y., Bai X., Wang Y., Hou Q., Liu S., Zhang J.S., Chen S.Y., Li D., Liu X., Li Z., Wang W., Li J., Wei X., Ma B., Wan X.
Plant Biotechnol. J. 2022  20(8)  1470-1486
The OsEIL1-OsERF115-target gene regulatory module controls grain size and weight in rice.
Zhang H., Jang S.G., Lar S.M., Lee A.R., Cao F.Y., Seo J., Kwon S.W.
Plants (Basel) 2021  10(6) 
Genome-Wide Identification and Genetic Variations of the starch synthase Gene Family in Rice.
Baysal C., He W., Drapal M., Villorbina G., Medina V., Capell T., Khush G.S., Zhu C., Fraser P.D., Christou P.
Proc. Natl. Acad. Sci. U.S.A. 2020  117(42)  26503-26512
Inactivation of rice starch branching enzyme IIb triggers broad and unexpected changes in metabolism by transcriptional reprogramming.
Chen C., He B., Liu X., Ma X., Liu Y., Yao H.Y., Zhang P., Yin J., Wei X., Koh H.J., Yang C., Xue H.W., Fang Z., Qiao Y.
Plant Biotechnol. J. 2019   
Pyrophosphate-fructose 6-phosphate 1-phosphotransferase (PFP1) regulates starch biosynthesis and seed development via heterotetramer formation in rice (Oryza sativa L.).
Liu E., Zeng S., Zhu S., Liu Y., Wu G., Zhao K., Liu X., Liu Q., Dong Z., Dang X., Xie H., Li D., Hu X., Hong D.
Plant Physiol. 2019  181(3)  1207-1222
Favorable Alleles of <i>GRAIN-FILLING RATE1</i> Increase the Grain-Filling Rate and Yield of Rice.
Yuenyong W., Chinpongpanich A., Comai L., Chadchawan S., Buaboocha T.
BMC Plant Biol. 2018  18(1)  335
Downstream components of the calmodulin signaling pathway in the rice salt stress response revealed by transcriptome profiling and target identification.
Wada H., Masumoto-Kubo C., Tsutsumi K., Nonami H., Tanaka F., Okada H., Erra-Balsells R., Hiraoka K., Nakashima T., Hakata M., Morita S.
PLoS ONE 2017  12(7)  e0181272
Turgor-responsive starch phosphorylation in Oryza sativa stems: A primary event of starch degradation associated with grain-filling ability.
Lu F.H., Park Y.J.
J. Cereal Sci. 2012  56  706-712
An SNP downstream of the OsBEIIb gene is significantly associated with amylose content and viscosity properties in rice (Oryza sativa L.)
Park S.H., Chung P.J., Juntawong P., Bailey-Serres J., Kim Y.S., Jung H., Bang S.W., Kim Y.K., Do Choi Y., Kim J.K.
Plant Physiol. 2012  159(3)  1111-24
Posttranscriptional Control of Photosynthetic mRNA Decay under Stress Conditions Requires 3' and 5' Untranslated Regions and Correlates with Differential Polysome Association in Rice.
Yan CJ,Tian ZX,Fang YW,Yang YC,Li J,Zeng SY,Gu SL,Xu CW,Tang SZ,Gu MH
Theor. Appl. Genet. 2011  122(1)  63-76
Genetic analysis of starch paste viscosity parameters in glutinous rice (Oryza sativa L.).
Tian,Z., Qian,Q., Liu,Q., Yan,M., Liu,X., Yan,C., Liu,G., Gao,Z., Tang,S., Zeng,D., Wang,Y., Yu,J., Gu,M. and Li,J.
Proc. Natl. Acad. Sci. U.S.A. 2009  106(51)  21760-5
Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities
Ryoo N, Yu C, Park CS, Baik MY, Park IM, Cho MH, Bhoo SH, An G, Hahn TR, Jeon JS.
Plant Cell Rep. 2007  26(7)  1083-95
Knockout of a starch synthase gene OsSSIIIa/Flo5 causes white-core floury endosperm in rice (Oryza sativa L.).
Hirose T, Terao T.
Planta. 2004  220(1)  9-16
A comprehensive expression analysis of the starch synthase gene family in rice (Oryza sativa L.).
TextPresso Search Search textpresso for SSIIB ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0061113
Ontologies
Gene Ontology starch biosynthetic process( GO:0019252 )
chloroplast( GO:0009507 )
amyloplast( GO:0009501 )
starch synthase activity( GO:0009011 )
response to salt stress( GO:0009651 )
Trait Ontology seed composition based quality trait( TO:0000488 )
salt tolerance( TO:0006001 )
Plant Ontology seed( PO:0009010 )
plant ovary( PO:0009072 )
plant embryo( PO:0009009 )
leaf( PO:0025034 )
Related Strains
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Phenotype images
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Last updated
Aug 30, 2022

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