Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CAB2R
Gene Symbol Synonym cab2R, CAB-2, OsLhcp, Lhcb1, Lhcb1a, OsLhcb1, OsLhcb1a
Gene Name Synonym "Chlorophyll a-b binding protein 2, chloroplastic", LHCII type I CAB-2, light harvesting chlorophyll a/b binding protein 2
Chromosome No. 1
Explanation LHCP. P12331. X13909. Lhcb1a in Yamatani et al. 2018.
Trait Class Vegetative organ - Leaf
cDNA Accession No. AK121563
MSU ID LOC_Os01g41710.1
RAP ID Os01g0600900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Zeng F., Zhu L., Wang G., Liang Y., Ma D., Wang J.
Front Plant Sci 2022  13  915050
Higher CO2 Assimilation in Selected Rice Recombinant Inbred Lines Is Driven by Higher CO2 Diffusion and Light Use Efficiency Related to Leaf Anatomy and mesophyll cell Density.
Zhou K., Zhang C., Xia J., Yun P., Wang Y., Ma T., Li Z.
Rice (N Y) 2021  14(1)  47
Albino seedling lethality 4; Chloroplast 30S Ribosomal Protein S1 is Required for Chloroplast Ribosome Biogenesis and Early Chloroplast Development in Rice.
Lian L., Lin Y., Wei Y., He W., Cai Q., Huang W., Zheng Y., Xu H., Wang F., Zhu Y., Luo X., Xie H., Zhang J.
BMC Plant Biol. 2021  21(1)  287
PEPC of sugarcane regulated glutathione S-transferase and altered carbon-nitrogen metabolism under different N source concentrations in Oryza sativa.
Zhu X., Ze M., Yin J., Chern M., Wang M., Zhang X., Deng R., Li Y., Liao H., Wang L., Tu B., Song L., He M., Li S., Wang W.M., Chen X., Wang J., Li W.
Plant Sci. 2020  290  110295
A phosphofructokinase B-type carbohydrate kinase family protein, PFKB1, is essential for chloroplast development at early seedling stage in rice.
He Y., Li L., Zhang Z., Wu J.L.
Int J Mol Sci 2018  19(1) 
Identification and Comparative Analysis of Premature Senescence Leaf Mutants in Rice (Oryza sativa L.).
Chen N., Wang P., Li C., Wang Q., Pan J., Xiao F., Wang Y., Zhang K., Li C., Yang B., Sun C., Deng X.
Plant Cell Physiol. 2018   
A single nucleotide mutation of IspE gene participating in the MEP pathway for isoprenoid biosynthesis causes green-revertible yellow leaf phenotype in rice.
Yamatani H., Kohzuma K., Nakano M., Takami T., Kato Y., Hayashi Y., Monden Y., Okumoto Y., Abe T., Kumamaru T., Tanaka A., Sakamoto W., Kusaba M.
J. Exp. Bot. 2018  69(5)  1027-1035
Impairment of Lhca4, a subunit of LHCI, causes high accumulation of chlorophyll and the stay-green phenotype in rice.
Kwon C.T., Kim S.H., Song G., Kim D., Paek N.C.
Rice (N Y) 2017  10(1)  1
Two NADPH: Protochlorophyllide Oxidoreductase (POR) Isoforms Play Distinct Roles in Environmental Adaptation in Rice.
Wang Y., Ren Y., Zhou K., Liu L., Wang J., Xu Y., Zhang H., Zhang L., Feng Z., Wang L., Ma W., Wang Y., Guo X., Zhang X., Lei C., Cheng Z., Wan J.
Front Plant Sci 2017  8  1116
WHITE STRIPE LEAF4 Encodes a Novel P-Type PPR Protein Required for Chloroplast Biogenesis during Early Leaf Development.
Zhu X., Liang S., Yin J., Yuan C., Wang J., Li W., He M., Wang J., Chen W., Ma B., Wang Y., Qin P., Li S., Chen X.
Gene 2015   
The DnaJ OsDjA7/8 is essential for chloroplast development in rice (Oryza sativa).
Deng X.J., Zhang H.Q., Wang Y., He F., Liu J.L., Xiao X., Shu Z.F., Li W., Wang G.H., Wang G.L.
PLoS ONE 2014  9(6)  e99564
Mapped clone and functional analysis of leaf-color gene ygl7 in a rice hybrid (Oryza sativa L. ssp. indica).
Chen H., Cheng Z., Ma X., Wu H., Liu Y., Zhou K., Chen Y., Ma W., Bi J., Zhang X., Guo X., Wang J., Lei C., Wu F., Lin Q., Liu Y., Liu L., Jiang L.
Plant Cell Rep. 2013  32(12)  1855-67
A knockdown mutation of YELLOW-GREEN LEAF2 blocks chlorophyll biosynthesis in rice.
Zhou K., Ren Y., Lv J., Wang Y., Liu F., Zhou F., Zhao S., Chen S., Peng C., Zhang X., Guo X., Cheng Z., Wang J., Wu F., Jiang L., Wan J.
Planta 2013  237(1)  279-92
Young leaf chlorosis 1, a chloroplast-localized gene required for chlorophyll and lutein accumulation during early leaf development in rice.
Higuchi-Takeuchi M., Ichikawa T., Kondou Y., Matsui K., Hasegawa Y., Kawashima M., Sonoike K., Mori M., Hirochika H., Matsui M.
Plant Physiol. 2011  157(1)  96-108
Functional analysis of two isoforms of leaf-type Ferredoxin-NADP(+)-oxidoreductase in rice using the heterologous expression system of Arabidopsis.
Zhang Y., Su J., Duan S., Ao Y., Dai J., Liu J., Wang P., Li Y., Liu B., Feng D., Wang J., Wang H.
Plant Methods 2011  7(1)  30
A highly efficient rice green tissue protoplast system for transient gene expression and studying light/chloroplast-related processes.
Wu,Z., Zhang,X., He,B., Diao,L., Sheng,S., Wang,J., Guo,X., Su,N., Wang,L., Jiang,L., Wang,C., Zhai,H. and Wan,J.
Plant Physiol. 2007  145(1)  29-40
A chlorophyll-deficient rice mutant with impaired chlorophyllide esterification in chlorophyll biosynthesis
Luan,S. and Bogorad,L.
Nucleic Acids Res. 1989  17(6)  2357-2358
Nucleotide sequences of two genes encoding the light harvesting chlorophyll a/b binding protein of rice.
TextPresso Search Search textpresso for CAB2R ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology magnesium ion binding( GO:0000287 )
chloroplast( GO:0009507 )
photosystem I( GO:0009522 )
photosystem II( GO:0009523 )
plastid( GO:0009536 )
photosynthesis, light harvesting( GO:0009765 )
photosynthesis( GO:0015979 )
integral to membrane( GO:0016021 )
chlorophyll binding( GO:0016168 )
chloroplast organization( GO:0009658 )
chloroplast thylakoid membrane( GO:0009535 )
protein-chromophore linkage( GO:0018298 )
Trait Ontology chloroplast development trait( TO:0002715 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Oct 13, 2022