|
Basic Information
|
|
CGSNL Gene Symbol
|
CAB2R
|
|
Gene Symbol Synonym
|
Oscab2R, CAB-2, OsLhcp, Lhcb1, Lhcb1a, OsLhcb1, OsLhcb1a
|
|
CGSNL Gene Name
|
CHLOROPHYLL A/B BINDING PROTEIN 2R
|
|
Gene Name Synonym
|
"Chlorophyll a-b binding protein 2, chloroplastic", LHCII type I CAB-2, light harvesting chlorophyll a/b binding protein 2
|
|
Protein Name
|
CHLOROPHYLL A/B BINDING PROTEIN 2R
|
|
Allele
|
|
|
Chromosome No.
|
1
|
|
Explanation
|
LHCP. P12331. X13909. Lhcb1a in Yamatani et al. 2018.
|
|
Trait Class
|
Vegetative organ - Leaf
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK121563
|
|
MSU ID
|
LOC_Os01g41710.1
|
|
RAP ID
|
Os01g0600900
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
Link to INSD Accession List
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Chen H., Wang Q., Fan M., Zhang X., Feng P., Zhu L., Wu J., Cheng X., Wang J.
Int J Mol Sci 2023 24(6)
A Single Nucleotide Variation of <i>CRS2</i> Affected the Establishment of Photosynthetic System in Rice.
|
|
Zeng F., Zhu L., Wang G., Liang Y., Ma D., Wang J.
Front Plant Sci 2022 13 915050
Higher CO2 Assimilation in Selected Rice Recombinant Inbred Lines Is Driven by Higher CO2 Diffusion and Light Use Efficiency Related to Leaf Anatomy and mesophyll cell Density.
|
|
Wang B., Wang Y., Yu W., Wang L., Lan Q., Wang Y., Chen C., Zhang Y.
Biology (Basel) 2022 11(12)
Knocking Out the Transcription Factor OsNAC092 Promoted Rice drought tolerance.
|
|
Zhou K., Zhang C., Xia J., Yun P., Wang Y., Ma T., Li Z.
Rice (N Y) 2021 14(1) 47
Albino seedling lethality 4; Chloroplast 30S Ribosomal Protein S1 is Required for Chloroplast Ribosome Biogenesis and Early Chloroplast Development in Rice.
|
|
Lian L., Lin Y., Wei Y., He W., Cai Q., Huang W., Zheng Y., Xu H., Wang F., Zhu Y., Luo X., Xie H., Zhang J.
BMC Plant Biol. 2021 21(1) 287
PEPC of sugarcane regulated glutathione S-transferase and altered carbon-nitrogen metabolism under different N source concentrations in Oryza sativa.
|
|
Zhu X., Ze M., Yin J., Chern M., Wang M., Zhang X., Deng R., Li Y., Liao H., Wang L., Tu B., Song L., He M., Li S., Wang W.M., Chen X., Wang J., Li W.
Plant Sci. 2020 290 110295
A phosphofructokinase B-type carbohydrate kinase family protein, PFKB1, is essential for chloroplast development at early seedling stage in rice.
|
|
He Y., Li L., Zhang Z., Wu J.L.
Int J Mol Sci 2018 19(1)
Identification and Comparative Analysis of Premature Senescence Leaf Mutants in Rice (Oryza sativa L.).
|
|
Chen N., Wang P., Li C., Wang Q., Pan J., Xiao F., Wang Y., Zhang K., Li C., Yang B., Sun C., Deng X.
Plant Cell Physiol. 2018
A single nucleotide mutation of IspE gene participating in the MEP pathway for isoprenoid biosynthesis causes green-revertible yellow leaf phenotype in rice.
|
|
Yamatani H., Kohzuma K., Nakano M., Takami T., Kato Y., Hayashi Y., Monden Y., Okumoto Y., Abe T., Kumamaru T., Tanaka A., Sakamoto W., Kusaba M.
J. Exp. Bot. 2018 69(5) 1027-1035
Impairment of Lhca4, a subunit of LHCI, causes high accumulation of chlorophyll and the stay-green phenotype in rice.
|
|
Wang Y., Ren Y., Zhou K., Liu L., Wang J., Xu Y., Zhang H., Zhang L., Feng Z., Wang L., Ma W., Wang Y., Guo X., Zhang X., Lei C., Cheng Z., Wan J.
Front Plant Sci 2017 8 1116
WHITE STRIPE LEAF4 Encodes a Novel P-Type PPR Protein Required for Chloroplast Biogenesis during Early Leaf Development.
|
|
Kwon C.T., Kim S.H., Song G., Kim D., Paek N.C.
Rice (N Y) 2017 10(1) 1
Two NADPH: Protochlorophyllide Oxidoreductase (POR) Isoforms Play Distinct Roles in Environmental Adaptation in Rice.
|
|
Zhu X., Liang S., Yin J., Yuan C., Wang J., Li W., He M., Wang J., Chen W., Ma B., Wang Y., Qin P., Li S., Chen X.
Gene 2015
The DnaJ OsDjA7/8 is essential for chloroplast development in rice (Oryza sativa).
|
|
Deng X.J., Zhang H.Q., Wang Y., He F., Liu J.L., Xiao X., Shu Z.F., Li W., Wang G.H., Wang G.L.
PLoS ONE 2014 9(6) e99564
Mapped clone and functional analysis of leaf-color gene ygl7 in a rice hybrid (Oryza sativa L. ssp. indica).
|
|
Chen H., Cheng Z., Ma X., Wu H., Liu Y., Zhou K., Chen Y., Ma W., Bi J., Zhang X., Guo X., Wang J., Lei C., Wu F., Lin Q., Liu Y., Liu L., Jiang L.
Plant Cell Rep. 2013 32(12) 1855-67
A knockdown mutation of YELLOW-GREEN LEAF2 blocks chlorophyll biosynthesis in rice.
|
|
Zhou K., Ren Y., Lv J., Wang Y., Liu F., Zhou F., Zhao S., Chen S., Peng C., Zhang X., Guo X., Cheng Z., Wang J., Wu F., Jiang L., Wan J.
Planta 2013 237(1) 279-92
Young leaf chlorosis 1, a chloroplast-localized gene required for chlorophyll and lutein accumulation during early leaf development in rice.
|
|
Higuchi-Takeuchi M., Ichikawa T., Kondou Y., Matsui K., Hasegawa Y., Kawashima M., Sonoike K., Mori M., Hirochika H., Matsui M.
Plant Physiol. 2011 157(1) 96-108
Functional analysis of two isoforms of leaf-type Ferredoxin-NADP(+)-oxidoreductase in rice using the heterologous expression system of Arabidopsis.
|
|
Zhang Y., Su J., Duan S., Ao Y., Dai J., Liu J., Wang P., Li Y., Liu B., Feng D., Wang J., Wang H.
Plant Methods 2011 7(1) 30
A highly efficient rice green tissue protoplast system for transient gene expression and studying light/chloroplast-related processes.
|
|
Wu,Z., Zhang,X., He,B., Diao,L., Sheng,S., Wang,J., Guo,X., Su,N., Wang,L., Jiang,L., Wang,C., Zhai,H. and Wan,J.
Plant Physiol. 2007 145(1) 29-40
A chlorophyll-deficient rice mutant with impaired chlorophyllide esterification in chlorophyll biosynthesis
|
|
Luan,S. and Bogorad,L.
Nucleic Acids Res. 1989 17(6) 2357-2358
Nucleotide sequences of two genes encoding the light harvesting chlorophyll a/b binding protein of rice.
|
|
TextPresso Search
|
Search textpresso for CAB2R
( Recent references may be retrievable, but without any warranty )
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
magnesium ion binding( GO:0000287 )
chloroplast( GO:0009507 )
photosystem I( GO:0009522 )
photosystem II( GO:0009523 )
plastid( GO:0009536 )
photosynthesis, light harvesting( GO:0009765 )
photosynthesis( GO:0015979 )
integral to membrane( GO:0016021 )
chlorophyll binding( GO:0016168 )
chloroplast organization( GO:0009658 )
chloroplast thylakoid membrane( GO:0009535 )
protein-chromophore linkage( GO:0018298 )
|
|
Trait Ontology
|
chloroplast development trait( TO:0002715 )
|
|
Plant Ontology
|
-
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Oct 4, 2023
|
Update info.
Click here for feedback