Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol AMY3C
Gene Symbol Synonym Amy3A/B/C*(RAmy3A/B/C), AmyII-6, AMY1.7, Amy3C, RAmy3A/B/C, Amy3A/B/C*, Amy7, AMY3B, RAmy3C
CGSNL Gene Name ALPHA-AMYLASE 3C
Gene Name Synonym Alpha-amylase3C, Alpha-amylase isozyme 3C precursor, Alpha-amylase isozyme 3C, Amylase-7, Alpha-amylase-3A
Protein Name ALPHA-AMYLASE 3C
Allele
Chromosome No. 9
Explanation EC=3.2.1.1 1,4-alpha-D-glucan glucanohydrolase. P27939. X56338.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK101358
MSU ID LOC_Os09g28420.1
RAP ID Os09g0457800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Kitajima A, Asatsuma S, Okada H, Hamada Y, Kaneko K, Nanjo Y, Kawagoe Y, Toyooka K, Matsuoka K, Takeuchi M, Nakano A, Mitsui T.
Plant Cell 2009  21(9)  2844-58.
The rice alpha-amylase glycoprotein is targeted from the Golgi apparatus through the secretory pathway to the plastids.
Nanjo Y, Asatsuma S, Itoh K, Hori H, Mitsui T.
Biosci. Biotechnol. Biochem. 2004  68(1)  112-8.
Proteomic identification of alpha-amylase isoforms encoded by RAmy3B/3C from germinating rice seeds.
Hwang YS, Thomas BR, Rodriguez RL.
Plant Mol. Biol. 1999  40(6)  911-920
Differential expression of rice alpha-amylase genes during seedling development under anoxia.
Sheu JJ, Yu TS, Tong WF, Yu SM.
J. Biol. Chem. 1996  271(43)  26998-7004
Carbohydrate starvation stimulates differential expression of rice alpha-amylase genes that is modulated through complicated transcriptional and posttranscriptional processes.
Parco, A., G. Magpantay, G. Second, R. Rodriguez and N. Huang
RGN 1994  11  137-140.
Restriction fragment length polymorphism and linkage analysis of rice alpha-amylase gene family.
Causse, M.A., T.M. Fulton, Y.G. Cho, S.N. Ahn, J. Chunwongse, K. Wu, J. Xiao, Z. Yu, P.C. Ronald, S.E. Harrington, G. Second, S.R. McCouch and S.D. Tanksley
Genetics 1994  138  1251-1274.
Saturated molecular map of the rice genome based on an interspecific backcross population.
Yu,S.M., Tzou,W.S., Lo,W.S., Kuo,Y.H., Lee,H.T. and Wu,R.
Gene 1992  122(2)  247-253
Regulation of alpha-amylase-encoding gene expression in germinating seeds and cultured cells of rice
Sutliff,T.D., Huang,N., Litts,J.C. and Rodriguez,R.L.
Plant Mol. Biol. 1991  16(4)  579-591
Characterization of an alpha-amylase multigene cluster in rice.
Rodriguez, R.L., N. Huang, T. Sutliff, S. Ranjhan, E. Karrer and J. Litts
Rice Genetics. II. IRRI, Manila, Philippines. 1991    417-429.
Organization, structure and expression of the alpha-amylase multigene family.
Ranjhan, S., J.C. Litts, M.R. Foolad and R.L. Rodriguez
Theor. Appl. Genet. 1991  82  481-488.
Chromosomal localization and genomic organization of alpha-amylase genes in rice (Oryza sativa L.).
Huang,N., Sutliff,T.D., Litts,J.C. and Rodriguez,R.L.
Plant Mol. Biol. 1990  14(5)  655-668
Classification and characterization of the rice alpha-amylase multigene family.
TextPresso Search Search textpresso for AMY3C ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0061335
Ontologies
Gene Ontology alpha-amylase activity( GO:0004556 )
cytoplasmic membrane-bounded vesicle( GO:0016023 )
sucrose catabolic process( GO:0005987 )
starch catabolic process( GO:0005983 )
carbohydrate metabolic process( GO:0005975 )
calcium ion binding( GO:0005509 )
response to gibberellin stimulus( GO:0009739 )
Trait Ontology gibberellic acid sensitivity( TO:0000166 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Aug 7, 2014


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