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Basic Information
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CGSNL Gene Symbol
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AMY3C
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Gene Symbol Synonym
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Amy3A/B/C*(RAmy3A/B/C), AmyII-6, AMY1.7, Amy3C, RAmy3A/B/C, Amy3A/B/C*, Amy7, AMY3B, RAmy3C, OsAmy3B
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CGSNL Gene Name
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ALPHA-AMYLASE 3C
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Gene Name Synonym
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Alpha-amylase3C, Alpha-amylase isozyme 3C precursor, Alpha-amylase isozyme 3C, Amylase-7, Alpha-amylase-3A
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Protein Name
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ALPHA-AMYLASE 3C
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Allele
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Chromosome No.
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9
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Explanation
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EC=3.2.1.1 1,4-alpha-D-glucan glucanohydrolase. P27939. X56338. OsAmy3B in Suriyasak et al. 2020.
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Trait Class
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Biochemical character
Seed - Physiological traits - Dormancy
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK101358
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MSU ID
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LOC_Os09g28420.1
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RAP ID
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Os09g0457800
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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He Y., Zhu M., Li Z., Jiang S., He Z., Xu S., Chen X., Hu Z., Zhang Z.
Int J Mol Sci 2021 22(12)
<i>IPA1</i> Negatively Regulates Early Rice Seedling Development by Interfering with Starch Metabolism via the GA and <i>WRKY</i> Pathways.
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Suriyasak C., Oyama Y., Ishida T., Mashiguchi K., Yamaguchi S., Hamaoka N., Iwaya-Inoue M., Ishibashi Y.
Sci Rep 2020 10(1) 17378
Mechanism of delayed seed germination caused by high temperature during grain filling in rice (Oryza sativa L.).
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Kitajima A, Asatsuma S, Okada H, Hamada Y, Kaneko K, Nanjo Y, Kawagoe Y, Toyooka K, Matsuoka K, Takeuchi M, Nakano A, Mitsui T.
Plant Cell 2009 21(9) 2844-58.
The rice alpha-amylase glycoprotein is targeted from the Golgi apparatus through the secretory pathway to the plastids.
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Nanjo Y, Asatsuma S, Itoh K, Hori H, Mitsui T.
Biosci. Biotechnol. Biochem. 2004 68(1) 112-8.
Proteomic identification of alpha-amylase isoforms encoded by RAmy3B/3C from germinating rice seeds.
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Hwang YS, Thomas BR, Rodriguez RL.
Plant Mol. Biol. 1999 40(6) 911-920
Differential expression of rice alpha-amylase genes during seedling development under anoxia.
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Sheu JJ, Yu TS, Tong WF, Yu SM.
J. Biol. Chem. 1996 271(43) 26998-7004
Carbohydrate starvation stimulates differential expression of rice alpha-amylase genes that is modulated through complicated transcriptional and posttranscriptional processes.
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Causse, M.A., T.M. Fulton, Y.G. Cho, S.N. Ahn, J. Chunwongse, K. Wu, J. Xiao, Z. Yu, P.C. Ronald, S.E. Harrington, G. Second, S.R. McCouch and S.D. Tanksley
Genetics 1994 138 1251-1274.
Saturated molecular map of the rice genome based on an interspecific backcross population.
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Parco, A., G. Magpantay, G. Second, R. Rodriguez and N. Huang
RGN 1994 11 137-140.
Restriction fragment length polymorphism and linkage analysis of rice alpha-amylase gene family.
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Yu,S.M., Tzou,W.S., Lo,W.S., Kuo,Y.H., Lee,H.T. and Wu,R.
Gene 1992 122(2) 247-253
Regulation of alpha-amylase-encoding gene expression in germinating seeds and cultured cells of rice
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Ranjhan, S., J.C. Litts, M.R. Foolad and R.L. Rodriguez
Theor. Appl. Genet. 1991 82 481-488.
Chromosomal localization and genomic organization of alpha-amylase genes in rice (Oryza sativa L.).
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Sutliff,T.D., Huang,N., Litts,J.C. and Rodriguez,R.L.
Plant Mol. Biol. 1991 16(4) 579-591
Characterization of an alpha-amylase multigene cluster in rice.
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Rodriguez, R.L., N. Huang, T. Sutliff, S. Ranjhan, E. Karrer and J. Litts
Rice Genetics. II. IRRI, Manila, Philippines. 1991 417-429.
Organization, structure and expression of the alpha-amylase multigene family.
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Huang,N., Sutliff,T.D., Litts,J.C. and Rodriguez,R.L.
Plant Mol. Biol. 1990 14(5) 655-668
Classification and characterization of the rice alpha-amylase multigene family.
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TextPresso Search
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Search textpresso for AMY3C
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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GR:0061335
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Ontologies
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Gene Ontology
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seed germination( GO:0009845 )
response to heat( GO:0009408 )
alpha-amylase activity( GO:0004556 )
cytoplasmic membrane-bounded vesicle( GO:0016023 )
sucrose catabolic process( GO:0005987 )
starch catabolic process( GO:0005983 )
carbohydrate metabolic process( GO:0005975 )
calcium ion binding( GO:0005509 )
response to gibberellin stimulus( GO:0009739 )
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Trait Ontology
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gibberellic acid sensitivity( TO:0000166 )
heat tolerance( TO:0000259 )
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Plant Ontology
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0 seed germination stage( PO:0007057 )
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Related Strains
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Phenotype images
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Last updated
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Oct 20, 2021
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