|
Basic Information
|
|
CGSNL Gene Symbol
|
AMY1A
|
|
Gene Symbol Synonym
|
Amy1A/C*(RAmy1A/C), alpha Amy7, AMY1.1, Amy1A, RAmy1A/C, Amy1A/C*, Amy1, Amy1A_C, OsAmy1A, alphaAmy7-C, RAmy1A
|
|
CGSNL Gene Name
|
ALPHA-AMYLASE 1A
|
|
Gene Name Synonym
|
Alpha-amylase1A, Alpha-amylase-1A, Alpha-amylase isozyme 1B, Amylase-1
|
|
Protein Name
|
ALPHA-AMYLASE 1A
|
|
Allele
|
|
|
Chromosome No.
|
2
|
|
Explanation
|
EC=3.2.1.1 Alpha-amylase, 1,4-alpha-D-glucan glucanohydrolase. Os02g0765600. M24286. AK101744. P17654. Innate immunity
|
|
Trait Class
|
Biochemical character
|
|
Expression
|
embryo - Em6 - First leaf formation
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK101744
|
|
MSU ID
|
LOC_Os02g52710.1
|
|
RAP ID
|
Os02g0765600
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
Link to INSD Accession List
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Huang X., Peng X., Sun M.X.
New Phytol. 2017 215(3) 1039-1058
OsGCD1 is essential for rice fertility and required for embryo dorsal-ventral pattern formation and endosperm development.
|
|
Zhang D., Chen L., Li D., Lv B., Chen Y., Chen J., XuejiaoYan, Liang J.
PLoS ONE 2014 9(5) e97120
OsRACK1 is involved in abscisic acid- and H2O2-mediated signaling to regulate seed germination in rice (Oryza sativa, L.).
|
|
Cheng X., Wu Y., Guo J., Du B., Chen R., Zhu L., He G.
Plant J. 2013 76(4) 687-98
A rice lectin receptor-like kinase that is involved in innate immune responses also contributes to seed germination.
|
|
Kitajima A, Asatsuma S, Okada H, Hamada Y, Kaneko K, Nanjo Y, Kawagoe Y, Toyooka K, Matsuoka K, Takeuchi M, Nakano A, Mitsui T.
Plant Cell 2009 21(9) 2844-58.
The rice alpha-amylase glycoprotein is targeted from the Golgi apparatus through the secretory pathway to the plastids.
|
|
Washio K.
Plant Physiol. 2003 133(2) 850-863
Functional dissections between GAMYB and Dof transcription factors suggest a role for protein-protein associations in the gibberellin-mediated expression of the RAmy1A gene in the rice aleurone.
|
|
Hwang YS, Thomas BR, Rodriguez RL.
Plant Mol. Biol. 1999 40(6) 911-920
Differential expression of rice alpha-amylase genes during seedling development under anoxia.
|
|
Yamaguchi, J.
Breeding Science 1998 48 365-370.
Analysis of embryo-specific alpha-amylase using isolated mature rice embryos.
|
|
Sugimoto, N., G. Takeda, Y. Nagato and J. Yamaguchi
RGN 1997 14 148-150.
Temporal and spatial expression pattern of rice alpha-amylase gene RAmy1A during seed development.
|
|
Kobayashi, K., R. Ishikawa, M. Senda, S. Akada, T. Harada and M. Niizeki
RGN 1997 14 53-55.
Six glabrous phenotypes of rice classified with a scanning electron microscope.
|
|
Sheu JJ, Yu TS, Tong WF, Yu SM.
J. Biol. Chem. 1996 271(43) 26998-7004
Carbohydrate starvation stimulates differential expression of rice alpha-amylase genes that is modulated through complicated transcriptional and posttranscriptional processes.
|
|
Parco, A., G. Magpantay, G. Second, R. Rodriguez and N. Huang
RGN 1994 11 137-140.
Restriction fragment length polymorphism and linkage analysis of rice alpha-amylase gene family.
|
|
Causse, M.A., T.M. Fulton, Y.G. Cho, S.N. Ahn, J. Chunwongse, K. Wu, J. Xiao, Z. Yu, P.C. Ronald, S.E. Harrington, G. Second, S.R. McCouch and S.D. Tanksley
Genetics 1994 138 1251-1274.
Saturated molecular map of the rice genome based on an interspecific backcross population.
|
|
Yu,S.M., Tzou,W.S., Lo,W.S., Kuo,Y.H., Lee,H.T. and Wu,R.
Gene 1992 122(2) 247-253
Regulation of alpha-amylase-encoding gene expression in germinating seeds and cultured cells of rice
|
|
Rodriguez, R.L., N. Huang, T. Sutliff, S. Ranjhan, E. Karrer and J. Litts
Rice Genetics. II. IRRI, Manila, Philippines. 1991 417-429.
Organization, structure and expression of the alpha-amylase multigene family.
|
|
Ranjhan, S., J.C. Litts, M.R. Foolad and R.L. Rodriguez
Theor. Appl. Genet. 1991 82 481-488.
Chromosomal localization and genomic organization of alpha-amylase genes in rice (Oryza sativa L.).
|
|
O'Neill,S.D., Kumagai,M.H., Majumdar,A., Huang,N., Sutliff,T.D. and Rodriguez,R.L.
Mol. Gen. Genet. 1990 221(2) 235-244
The alpha-amylase genes in Oryza sativa: characterization of cDNA clones and mRNA expression during seed germination.
|
|
Huang,N., Sutliff,T.D., Litts,J.C. and Rodriguez,R.L.
Plant Mol. Biol. 1990 14(5) 655-668
Classification and characterization of the rice alpha-amylase multigene family.
|
|
Huang,N., Koizumi,N., Reinl,S. and Rodriguez,R.L.
Nucleic Acids Res. 1990 18(23) 7007-7014
Structural organization and differential expression of rice alpha-amylase genes.
|
|
TextPresso Search
|
Search textpresso for AMY1A
( Recent references may be retrievable, but without any warranty )
|
|
DB Reference
|
|
Gramene ID
|
GR:0060043
|
|
Ontologies
|
|
Gene Ontology
|
alpha-amylase activity( GO:0004556 )
cytoplasmic membrane-bounded vesicle( GO:0016023 )
sucrose catabolic process( GO:0005987 )
starch catabolic process( GO:0005983 )
calcium ion binding( GO:0005509 )
|
|
Trait Ontology
|
-
|
|
Plant Ontology
|
-
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Jan 7, 2018
|
Update info.
Click here for feedback