Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CL
Gene Symbol Synonym Cl
Gene Name Synonym Clustered spikelets
Protein Name
Chromosome No. 6
Explanation Internode of upper half of rachilla being shortened, spikelets appear grown together from tha same place. [301] PO:0009049; inflorescence. GRO:0007044; 06-heading stage ; GRO:0007042; 08-dough stage ; GRO:0007045; 09-mature grain stage ; GRO:0007046; 07-milk stage.
Trait Class Reproductive organ - Inflorescence
cDNA Accession No. -
Links -
INSD Accession List
(Test version)
Link to INSD Accession List
Locate(cM) 96.0
Link map Classical linkage map
Yu, Z.H., S.R. McCouch, T. Kinoshita, S. Sato and S.D. Tanksley
Genome 1995  38  566-574.
Association of morphological and RFLP markers in rice (Oryza sativa L. ).
Murai, M. and M. Iizawa
Breeding Science 1994  44  247-255.
Effects of major genes controlling morphology of panicle in rice.
Causse, M.A., T.M. Fulton, Y.G. Cho, S.N. Ahn, J. Chunwongse, K. Wu, J. Xiao, Z. Yu, P.C. Ronald, S.E. Harrington, G. Second, S.R. McCouch and S.D. Tanksley
Genetics 1994  138  1251-1274.
Saturated molecular map of the rice genome based on an interspecific backcross population.
Sato, S. and C. Shinjyo
Japan. J. Breed. 1991  41(3)  451-459.
Genetical studies on genic male sterile mutant obtained through breeding of isogenic translocation line of Taichung 65 in rice, Oryza sativa L.
Pavithran, K., P.T. Annie, R. Shyla, C.P.S. Kumar and B. Shobha
S. Iyama and G. Takeda (eds.), Proc. 6th Internat. Congress of SABRAO. 1989  I  397-400.
Developmental genetic studies in rice, Oryza sativa L.
Kinoshita, T.
In Biology of Rice. S. Tsunoda and N. Takahashi eds. JSSP/Elsevier, Tokyo. 1984    187-274.
Gene analysis and linkage map.
Nagao, S., M. Takahashi and K. Morimura
Mem. Fac. Agr. Hokkaido Univ. 1964  5(2)  89-96.
Genetical studies on rice plant, XXVIII. Causal genes and their linkage relationships of some morphological characters introduced from foreign rice varieties.
Nagao, S. and M. Takahashi
J. Fac. Agr. Hokkaido Univ. 1963  53(1)  72-130.
Trial construction of twelve linkage groups in Japanese rice. (Genetical studies on rice plant, XXVII).
Jodon, N.E.
J. Hered. 1957  48(4)  181-192.
Inheritance of some of the more striking character in rice.
TextPresso Search Search textpresso for CL ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060141
Gene Ontology multicellular organismal development( GO:0007275 )
Trait Ontology spikelet fertility( TO:0000180 )
panicle type( TO:0000089 )
panicle length( TO:0000040 )
Plant Ontology inflorescence( PO:0009049 )
Related Strains
Stocks for Genes 1
F Lines 6
Backcross Fn Generation (T65) 2
Phenotype images
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Photo from A. Yoshimura
Last updated
May 1, 2011