Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol ST1
Gene Symbol Synonym st1(ws1), ws1, st1, RNRS1, rnrs1, RNRS, SDL/RNRS1, SDL
CGSNL Gene Name STRIPE 1
Gene Name Synonym stripe1, stripe 1, stripe-1, ribonucleotide reductase small subunit 1, stripe and drooping leaf
Protein Name RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT 1
Allele sdl
Chromosome No. 6
Explanation LOC_Os06g14620. PO:0009025; leaf. GRO:0007048; 04-stem elongation stage ; GRO:0007148; 05-booting stage ; GRO:0007049; 03-tillering stage ; GRO:0007047; 02-seedling. EU602345. homologous to Arabidopsis TSO2. GO:0099402: plant organ development. GO:0090391: granum assembly.
Trait Class Coloration - Chlorophyll
Expression
Sequence/Locus
cDNA Accession No. EU602345
MSU ID LOC_Os06g14620.1
RAP ID Os06g0257450
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM) 65.0
Link map Classical linkage map
References
Xiao H., Xu Y., Ni C., Zhang Q., Zhong F., Huang J., Liu W., Peng L., Zhu Y., Hu J.
J. Exp. Bot. 2018  69(12)  2923-2936
A rice dual-localized pentatricopeptide repeat protein is involved in organellar RNA editing together with OsMORFs.
Lin D., Zheng K., Liu Z., Li Z., Teng S., Xu J., Dong Y.
Plant Genome 2018  11(1) 
Rice <i>TCM1</i> Encoding a Component of the TAC Complex is Required for Chloroplast Development under Cold Stress.
Zhang Z., Cui X., Wang Y., Wu J., Gu X., Lu T.
Mol Plant 2017  10(1)  86-98
The RNA Editing Factor wsp1 Is Essential for Chloroplast Development in Rice.
Qin R., Zeng D., Liang R., Yang C., Akhter D., Alamin M., Jin X., Shi C.
Gene 2017  627  351-362
Rice gene SDL/RNRS1, encoding the small subunit of ribonucleotide reductase, is required for chlorophyll synthesis and plant growth development.
Yoo,S.C., Cho,S.H., Sugimoto,H., Li,J., Kusumi,K., Koh,H.J., Iba,K. and Paek,N.C.
Plant Physiol. 2009  150(1)  388-401
Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development
Kinoshita, T.
In Biology of Rice. S. Tsunoda and N. Takahashi eds. JSSP/Elsevier, Tokyo. 1984    187-274.
Gene analysis and linkage map.
Nagamatsu, T. and T. Omura
Japan. J. Breed. 1962  12(4)  231-236.
Linkage study of the genes belonging to the first chromosome in rice.
TextPresso Search Search textpresso for ST1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060928
Ontologies
Gene Ontology chlorophyll biosynthetic process( GO:0015995 )
response to temperature stimulus( GO:0009266 )
chlorophyll a biosynthetic process( GO:0033305 )
chloroplast organization( GO:0009658 )
Trait Ontology variegated leaf( TO:0000069 )
chlorophyll content( TO:0000495 )
temperature response trait( TO:0000432 )
leaf color( TO:0000326 )
Plant Ontology vascular leaf( PO:0009025 )
Related Strains
F Lines 4
Backcross Fn Generation (T65) 2
Phenotype images
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Photo from A. Yoshimura
Last updated
Jan 30, 2019


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