Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol YAB5
Gene Symbol Synonym OsYABBY5, OsYAB3, YAB3, Os YABBY5, TOB1, OsTPB1
CGSNL Gene Name YABBY 5
Gene Name Synonym Protein YABBY 5, TONGARI-BOUSHI1, TONGARI-BOUSHI 1
Protein Name PROTEIN YABBY 5
Allele tob1
Chromosome No. 4
Explanation BAF15337. Q0JBF0. OsYAB3 in Dai et al. 2007.
Trait Class Vegetative organ - Leaf
Reproductive organ - Spikelet, flower, glume, awn
Other
Expression
Sequence/Locus
cDNA Accession No. AK070205
MSU ID LOC_Os04g45330.1
RAP ID Os04g0536300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Abbai R., Singh V.K., Nachimuthu V.V., Sinha P., Selvaraj R., Vipparla A.K., Singh A.K., Singh U.M., Varshney R.K., Kumar A.
Plant Biotechnol. J. 2019   
Haplotype analysis of key genes governing grain yield and quality traits across 3K RG panel reveals scope for the development of tailor-made rice with enhanced genetic gains.
Tanaka W., Toriba T., Hirano H.Y.
New Phytol. 2017  215(2)  825-839
Three TOB1-related YABBY genes are required to maintain proper function of the spikelet and branch meristems in rice.
Liu X., Li M., Liu K., Tang D., Sun M., Li Y., Shen Y., Du G., Cheng Z.
J. Exp. Bot. 2016  67(8)  2139-50
Semi-Rolled Leaf2 modulates rice leaf rolling by regulating abaxial side cell differentiation.
Khanday I., Das S., Chongloi G.L., Bansal M., Grossniklaus U., Vijayraghavan U.
Plant Physiol. 2016  172(1)  372-88
Genome-Wide Targets Regulated by the OsMADS1 Transcription Factor Reveals Its DNA Recognition Properties.
Li Y.Y., Shen A., Xiong W., Sun Q.L., Luo Q., Song T., Li Z.L., Luan W.J.
Rice (N Y) 2016  9(1)  46
Overexpression of OsHox32 Results in Pleiotropic Effects on Plant Type Architecture and Leaf Development in Rice.
Tanaka W., Toriba T., Ohmori Y., Yoshida A., Kawai A., Mayama-Tsuchida T., Ichikawa H., Mitsuda N., Ohme-Takagi M., Hirano H.Y.
Plant Cell 2012  24(1)  80-95
The YABBY gene TONGARI-BOUSHI1 is involved in lateral organ development and maintenance of meristem organization in the rice spikelet.
Zhou, Dao-Xiu
Plant Physiol. 2007  144(1)  380-390
A WUSCHEL-LIKE HOMEOBOX Gene Represses a YABBY Gene Expression Required for Rice Leaf Development.
Toriba,T., Harada,K., Takamura,A., Nakamura,H., Ichikawa,H., Suzaki,T. and Hirano,H.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2007  277  457-468
Molecular characterization the YABBY gene family in Oryza sativa and expression analysis of OsYABBY1.
Jang S, Hur J, Kim SJ, Han MJ, Kim SR, An G.
Plant Mol. Biol. 2004  56(1)  133-143
Ectopic expression of OsYAB1 causes extra stamens and carpels in rice.
TextPresso Search Search textpresso for YAB5 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology nucleus( GO:0005634 )
cell differentiation( GO:0030154 )
metal ion binding( GO:0046872 )
flower development( GO:0009908 )
leaf development( GO:0048366 )
meristem maintenance( GO:0010073 )
floral organ development( GO:0048437 )
inflorescence development( GO:0010229 )
Trait Ontology leaf development trait( TO:0000655 )
flower development trait( TO:0000622 )
inflorescence development trait( TO:0000621 )
Plant Ontology leaf development stage( PO:0001050 )
floral organ primordium( PO:0025477 )
flower development stage( PO:0007615 )
vascular leaf primordium( PO:0000017 )
inflorescence development stage( PO:0001083 )
bract primordium( PO:0025487 )
Related Strains
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Phenotype images
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Last updated
Sep 3, 2019


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