Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol RPBF
Gene Symbol Synonym OsDof3, OsDOF3, OsEnS-34, OsDof10, Dof10, OsDof-10, OsDOF1, DOF1, DOF3, OsRPBF, OsDOF7
CGSNL Gene Name PROLAMIN BOX BINDING FACTOR
Gene Name Synonym rice (Oryza sativa) prolamin box binding factor, pyrimidine box-binding protein, endosperm-specific gene 34, Dof zinc factor 10, Dof transcription factor 10, DNA BINDING WITH ONE FINGER 10
Protein Name PROLAMIN BOX BINDING FACTOR
Allele
Chromosome No. 2
Explanation AB028131, AP005510. OsDof10 in Lijavetzky et al. 2003 and Zhang et al. 2015. OsDOF1 in Wang et al. 2015. OsDOF7 in Ku et al. 2021, Liu et al. 2021.
Trait Class Seed - Physiological traits - Storage substances
Tolerance and resistance
Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. AK107294
MSU ID LOC_Os02g15350.1
RAP ID Os02g0252400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Xu K., Chen S., Li T., Yu S., Zhao H., Liu H., Luo L.
Front Plant Sci 2021  12  711271
Overexpression of OsHMGB707, a High Mobility Group Protein, Enhances Rice drought tolerance by Promoting Stress-Related Gene Expression.
Liu J., Meng Q., Xiang H., Shi F., Ma L., Li Y., Liu C., Liu Y., Su B.
BMC Genomics 2021  22(1)  800
Genome-wide analysis of Dof transcription factors and their response to cold stress in rice (Oryza sativa L.).
Paul P., Dhatt B.K., Miller M., Folsom J.J., Wang Z., Krassovskaya I., Liu K., Sandhu J., Yu H., Zhang C., Obata T., Staswick P., Walia H.
Plant Physiol. 2020  182(2)  933-948
<i>MADS78</i> and <i>MADS79</i> Are Essential Regulators of Early Seed Development in Rice.
Lang Z., Gong Z.
Proc. Natl. Acad. Sci. U.S.A. 2018  115(46)  11659-11660
A role of <i>OsROS1</i> in aleurone development and nutrient improvement in rice.
Liu J., Wu X., Yao X., Yu R., Larkin P.J., Liu C.M.
Proc. Natl. Acad. Sci. U.S.A. 2018  115(44)  11327-11332
Mutations in the DNA demethylase <i>OsROS1</i> result in a thickened aleurone and improved nutritional value in rice grains.
Sim J.S., Kesawat M.S., Kumar M., Kim S.Y., Mani V., Subramanian P., Park S., Lee C.M., Kim S.R., Hahn B.S.
Int J Mol Sci 2018  19(4) 
Lack of the alpha1,3-Fucosyltransferase Gene (<i>OsFucT</i>) Affects Anther Development and pollen Viability in Rice.
Kim J.S., Chae S., Jun K.M., Pahk Y.M., Lee T.H., Chung P.J., Kim Y.K., Nahm B.H.
Rice (N Y) 2017  10(1)  16
Genome-wide identification of grain filling genes regulated by the OsSMF1 transcription factor in rice.
Wang X., Zhang M.M., Wang Y.J., Gao Y.T., Li R., Wang G.F., Li W.Q., Liu W.T., Chen K.M.
Physiol Plant 2015   
The plasma membrane NADPH oxidase OsRbohA plays a crucial role in developmental regulation and drought-stress response in rice.
Zhang Y., Verhoeff N.I., Chen Z., Chen S., Wang M., Zhu Z., Ouwerkerk P.B.
Plant Mol. Biol. 2015  89(3)  229-42
Functions of OsDof25 in regulation of OsC4PPDK.
Nie D.M., Ouyang Y.D., Wang X., Zhou W., Hu C.G., Yao J.
Gene 2013  530(2)  236-47
Genome-wide analysis of endosperm-specific genes in rice.
Gupta S.K., Rai A.K., Kanwar S.S., Chand D., Singh N.K., Sharma T.R.
J. Exp. Bot. 2012  63(2)  757-72
The single functional blast resistance gene Pi54 activates a complex defence mechanism in rice.
Park S.H., Yun D.W., Lee G.S., Yoon, Ung-Han, Ji H.S., Ahn B.O., Park S.C., Kim Y.H., Kim Y.K., Kim C.K.
African Journal of Biotechnology 2011  10  1802-1811
Molecular and genetic characterization of osh6 (Oryza sativa homeobox 6) using dissociation (Ds) insertion mutant rice
Kawakatsu T., Takaiwa F.
Plant Cell Physiol. 2010  51(12)  1964-1974
Differences in transcriptional regulatory mechanisms functioning for free lysine content and seed storage protein accumulation in rice grain.
Kawakatsu T,Yamamoto MP,Touno SM,Yasuda H,Takaiwa F
Plant J. 2009  59  908-20
Compensation and interaction between RISBZ1 and RPBF during grain filling in rice.
Iwamoto M,Higo K,Takano M
Plant Cell Environ. 2009  32  592-603
Circadian clock- and phytochrome-regulated Dof-like gene, Rdd1, is associated with grain size in rice.
Yamamoto MP, Onodera Y, Touno SM, Takaiwa F.
Plant Physiol. 2006  141(4)  1694-1707
Synergism between RPBF Dof and RISBZ1 bZIP activators in the regulation of rice seed expression genes.
Washio K, Morikawa M.
Biochim. Biophys. Acta 2006  1759(10)  478-90
Common mechanisms regulating expression of rice aleurone genes that contribute to the primary response for gibberellin.
Shuichi Yanagisawa
Plant Cell Physiol. 2004  45(4)  386-391
Dof Domain Proteins: Plant-Specific Transcription Factors Associated with Diverse Phenomena Unique to Plants
Washio K.
Plant Physiol. 2003  133(2)  850-863
Functional dissections between GAMYB and Dof transcription factors suggest a role for protein-protein associations in the gibberellin-mediated expression of the RAmy1A gene in the rice aleurone.
Lijavetzky D, Carbonero P, Vicente-Carbajosa J.
BMC Evol. Biol. 2003  3  17.
Genome-wide comparative phylogenetic analysis of the rice and Arabidopsis Dof gene families.
Shuichi Yanagisawa
Trends Plant Sci. 2002  7(12)  555-560
The Dof family of plant transcription factors
Washio K.
Biochim. Biophys. Acta 2001  1520(1)  54-62.
Identification of Dof proteins with implication in the gibberellin-regulated expression of a peptidase gene following the germination of rice grains.
Washio,K.
Plant Physiol. 1999  120(4)  1205-1207
cDNAs encoding Dof-proteins that are present in germinated aleurone cells (Accession Nos. AB028129, AB028130, AB028131, AB028132, and AB028133). (PGR99-107)
TextPresso Search Search textpresso for RPBF ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology regulation of transcription( GO:0045449 )
zinc ion binding( GO:0008270 )
DNA binding( GO:0003677 )
defense response( GO:0006952 )
response to water deprivation( GO:0009414 )
Trait Ontology biotic stress trait( TO:0000179 )
drought tolerance( TO:0000276 )
amino acid content( TO:0002673 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
May 24, 2022


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