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Basic Information
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CGSNL Gene Symbol
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DP1
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Gene Symbol Synonym
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dp1, pa, DP1/PAL1, PAL1, OsDP1, OsAHL11, AHL11
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CGSNL Gene Name
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DEPRESSED PALEA 1
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Gene Name Synonym
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depressed palea1, depressed palea 1, depressed palea-1, DEPRESSED PALEA1, PALEALESS1, OsDEPRESSED PALEA1, AT-hook motif DNA-binding protein 11, AT-hook motif nuclear localized protein 11
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Protein Name
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Allele
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dp1-1,dp1-2,dp1-3
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Chromosome No.
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6
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Explanation
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The palea is undergrown and hence the spikelet becomes crescent shape and kernel shape and size also abnormal. [294] PO:0009038; palea ; PO:0009009; embryo ; PO:0006318; floret (sensu Poaceae). GRO:0007044; 06-heading stage ; GRO:0007042; 08-dough stage ; GRO:0007045; 09-mature grain stage ; GRO:0007046; 07-milk stage.
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Trait Class
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Tolerance and resistance - Stress tolerance
Reproductive organ - Spikelet, flower, glume, awn
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK107405
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MSU ID
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LOC_Os06g04540.1
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RAP ID
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Os06g0136900
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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24.0
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Link map
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Classical linkage map
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References
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Kumar A., Singh S., Mishra A.
3 Biotech 2023 13(7) 248
Genome-wide identification and analyses of the AHL gene family in rice (<i>Oryza sativa</i>).
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Ambadas D.A., Singh A., Jha R.K., Chauhan D., B S., Sharma V.K.
Front Plant Sci 2023 14 1283555
Genome-wide dissection of AT-hook motif nuclear-localized gene family and their expression profiling for drought and salt stress in rice (<i>Oryza sativa</i>).
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Kannan P., Chongloi G.L., Majhi B.B., Basu D., Veluthambi K., Vijayraghavan U.
Planta 2021 253(2) 39
Characterization of a new rice OsMADS1 null mutant generated by homologous recombination-mediated gene targeting.
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Ren D., Rao Y., Wu L., Xu Q., Li Z., Yu H., Zhang Y., Leng Y., Hu J., Zhu L., Gao Z., Dong G., Zhang G., Guo L., Zeng D., Qian Q.
J Integr Plant Biol 2015
The pleiotropic ABNORMAL FLOWER AND DWARF1 affects plant height, floral development and grain yield in rice.
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Zhao J., David S Favero, Qiu J., Eric H Roalson, Michael M Neff
BMC Plant Biol. 2014 14 266
Insights into the evolution and diversification of the AT-hook Motif Nuclear Localized gene family in land plants.
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Jin Y., Luo Q., Tong H., Wang A., Cheng Z., Tang J., Li D., Zhao X., Li X., Wan J., Jiao Y., Chu C., Zhu L.
Dev. Biol. 2011 359(2) 277-88
An AT-hook gene is required for palea formation and floral organ number control in rice.
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Kim H.B., Oh C.J., Park Y.C., Lee Y., Choe S., An C.S., Choi S.B.
BMB Rep 2011 44(10) 680-5
Comprehensive analysis of AHL homologous genes encoding AT-hook motif nuclear localized protein in rice.
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Ideta, O., A. Yoshimura, T. Matsumoto, H. Tsunematsu and N. Iwata
Japan. J. Breed. 1993 43(Suppl. 2) 100
Integration of conventional and RFLP linkage maps in rice.IV. On choromosomes 6, 9 and 11.
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Iwata, N. and T. Omura
Sci. Bull. Fac. Agr. Kyushu Univ. 1971 25(3.4) 137-153.
Linkage analysis by reciprocal translocation method in rice plants (Oryza sativa L).II. Linkage groups corresponding to the chromosomes 5, 6, 8, 9, 10 and 11.
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Iwata, N. and T. Omura
Japan. J. Breed. 1971 21(1) 19-28.
Linkage analysis by reciprocal translocation method in rice plants (Oryza sativa L).I. Linkage groups corresponding to the chromosome 1, 2, 3 and 4.
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Nagamatsu, T. and T. Omura
Japan. J. Breed. 1962 12(4) 231-236.
Linkage study of the genes belonging to the first chromosome in rice.
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DB Reference
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Gramene ID
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GR:0060238
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Ontologies
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Gene Ontology
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multicellular organismal development( GO:0007275 )
transcription factor activity( GO:0003700 )
AT DNA binding( GO:0003680 )
vegetative to reproductive phase transition( GO:0010228 )
nucleus( GO:0005634 )
response to salt stress( GO:0009651 )
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Trait Ontology
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lemma and palea anatomy and morphology trait( TO:0000079 )
grain yield per plant( TO:0000449 )
seed shape( TO:0000484 )
salt tolerance( TO:0006001 )
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Plant Ontology
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spikelet floret( PO:0009082 )
plant embryo( PO:0009009 )
palea( PO:0009038 )
pollen( PO:0025281 )
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Related Strains
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Stocks for Genes
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1
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F Lines
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14
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Backcross Fn Generation (T65)
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4
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Phenotype images
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Click to full size image in new window
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Photo from
A. Yoshimura
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Last updated
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Feb 23, 2025
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Update info.