Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol YUCCA7
Gene Symbol Synonym OsYUCCA7, OsYUC7, OsYUC5, YUC5, YUC7
Gene Name Synonym (YUCCA-like gene)
Protein Name
Chromosome No. 4
Explanation an orthologue of AtYUCCA. YUC5 in Yuan et al. 2019.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK068976
MSU ID LOC_Os04g03980.1
RAP ID Os04g0128900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Han Y., Zhang C., Sha H., Wang X., Yu Y., Liu J., Zhao G., Wang J., Qiu G., Xu X., Fang J.
Rice (N Y) 2023  16(1)  9
Ubiquitin-conjugating enzyme OsUBC11 Affects the Development of Roots via Auxin Pathway.
Prakash S., Rai R., Zamzam M., Ahmad O., Peesapati R., Vijayraghavan U.
Front Plant Sci 2022  13  865928
OsbZIP47 Is an Integrator for Meristem Regulators During Rice Plant Growth and Development.
Wang H.Q., Xuan W., Huang X.Y., Mao C., Zhao F.J.
Plant Cell Physiol. 2021  62(1)  166-177
Cadmium Inhibits lateral root Emergence in Rice by Disrupting OsPIN-mediated Auxin Distribution and the Protective Effect of OsHMA3.
Zhang T., You J., Zhang Y., Yao W., Chen W., Duan Q., Xiao W., Ye L., Zhou Y., Sang X., Ling Y., He G., Li Y.
New Phytol. 2021   
lf1 regulates the lateral organs polarity development in rice.
Li H., Sun H., Jiang J., Sun X., Tan L., Sun C.
Plant Biotechnol. J. 2020   
TAC4 controls tiller angle by regulating the endogenous auxin content and distribution in rice.
Hu Y., Li S., Fan X., Song S., Zhou X., Weng X., Xiao J., Li X., Xiong L., You A., Xing Y.
Plant Physiol. 2020  184(3)  1424-1437
<i>OsHOX1</i> and <i>OsHOX28</i> Redundantly Shape Rice tiller angle by Reducing <i>HSFA2D</i> Expression and Auxin Content.
Yoon J., Cho L.H., Yang W., Pasriga R., Wu Y., Hong W.J., Bureau C., Wi S.J., Zhang T., Wang R., Zhang D., Jung K.H., Park K.Y., Périn C., Zhao Y., An G.
J. Exp. Bot. 2020   
Homeobox transcription factor OsZHD2 promotes root meristem activity in rice by inducing ethylene biosynthesis.
Yuan S., Kim S.C., Deng X., Hong Y., Wang X.
New Phytol. 2019  223(1)  261-276
Diacylglycerol kinase and associated lipid mediators modulate rice root architecture.
Guo T., Chen K., Dong N.Q., Ye W.W., Shan J.X., Lin H.X.
J Integr Plant Biol 2019   
Tillering and small grain 1 dominates the tryptophan aminotransferase family required for local auxin biosynthesis in rice.
Zhang N., Yu H., Yu H., Cai Y., Huang L., Xu C., Xiong G., Meng X., Wang J., Chen H., Liu G., Jing Y., Yuan Y., Liang Y., Li S., Smith S.M., Li J., Wang Y.
Plant Cell 2018  30(7)  1461-1475
A Core Regulatory Pathway Controlling Rice tiller angle Mediated by the <i>LAZY1</i>-Dependent Asymmetric Distribution of Auxin.
Xu Y.X., Xiao M.Z., Liu Y., Fu J.L., He Y., Jiang D.A.
Plant Mol. Biol. 2017   
The small auxin-up RNA OsSAUR45 affects auxin synthesis and transport in rice.
Li X., Yang D.L., Sun L., Li Q., Mao B., He Z.
Plant Physiol. 2016  172(1)  546-58
The Systemic Acquired Resistance Regulator OsNPR1 Attenuates Growth by Repressing Auxin Signaling through Promoting IAA-Amido Synthase Expression.
Abu-Zaitoon YM.
Appl. Biochem. Biotechnol. 2014  172(5)  2480-95
Phylogenetic analysis of putative genes involved in the tryptophan-dependent pathway of auxin biosynthesis in rice.
Fujino,K., Matsuda,Y., Ozawa,K., Nishimura,T., Koshiba,T., Fraaije,M.W. and Sekiguchi,H.
Mol. Genet. Genomics 2008  279(5)  499-507
NARROW LEAF 7 controls leaf shape mediated by auxin in rice
Hirano K., Aya K., Hobo T., Sakakibara H., Kojima M., Rosalyn Angeles Shim, Hasegawa Y., Miyako Ueguchi-Tanaka, Matsuoka M.
Plant & cell physiology 2008  49(10)  1429-50
Comprehensive transcriptome analysis of phytohormone biosynthesis and signaling genes in microspore/pollen and tapetum of rice.
Yamamoto Y, Kamiya N, Morinaka Y, Matsuoka M, Sazuka T.
Plant Physiol. 2007  143(3)  1362-1371
Auxin Biosynthesis by the YUCCA Genes in Rice.
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DB Reference
Gramene ID -
Gene Ontology response to cadmium ion( GO:0046686 )
flavin-containing monooxygenase activity( GO:0004499 )
auxin biosynthetic process( GO:0009851 )
response to gravity( GO:0009629 )
Trait Ontology gravity response trait( TO:0002693 )
Plant Ontology root( PO:0009005 )
Related Strains
Phenotype images
Last updated
Jun 19, 2023