Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol YUCCA5
Gene Symbol Synonym OsYUCCA5, OsYUC5, YUC5
CGSNL Gene Name YUCCA-LIKE GENE 5
Gene Name Synonym (YUCCA-like gene)
Protein Name
Allele
Chromosome No. 12
Explanation an orthologue of AtYUCCA.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os12g32750.1
RAP ID Os12g0512000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Xu K., Lou Q., Wang D., Li T., Chen S., Li T., Luo L., Chen L.
BMC Plant Biol. 2023  23(1)  319
Overexpression of a novel small auxin-up RNA gene, OsSAUR11, enhances rice deep rootedness.
Dai D., Zhang H., He L., Chen J., Du C., Liang M., Zhang M., Wang H., Ma L.
Int J Mol Sci 2022  23(16) 
<i>Panicle Apical Abortion 7</i> Regulates Panicle Development in Rice (<i>Oryza sativa</i> L.).
Wang J., Wan R., Nie H., Xue S., Fang Z.
The Crop Journal 2022  10  397-406
OsNPF5.16, a nitrate transporter gene with natural variation, is essential for rice growth and yield
Mao C., He J., Liu L., Deng Q., Yao X., Liu C., Qiao Y., Li P., Ming F.
Plant Biotechnol. J. 2020  18(2)  429-442
OsNAC2 integrates auxin and cytokinin pathways to modulate rice root development.
Hu Y., Li S., Fan X., Song S., Zhou X., Weng X., Xiao J., Li X., Xiong L., You A., Xing Y.
Plant Physiol. 2020  184(3)  1424-1437
<i>OsHOX1</i> and <i>OsHOX28</i> Redundantly Shape Rice tiller angle by Reducing <i>HSFA2D</i> Expression and Auxin Content.
Li H., Sun H., Jiang J., Sun X., Tan L., Sun C.
Plant Biotechnol. J. 2020   
TAC4 controls tiller angle by regulating the endogenous auxin content and distribution in rice.
Guo T., Wang D., Fang J., Zhao J., Yuan S., Xiao L., Li X.
Int J Mol Sci 2019  20(10) 
Mutations in the Rice <i>OsCHR4</i> Gene, Encoding a CHD3 Family Chromatin Remodeler, Induce Narrow and Rolled Leaves with Increased Cuticular Wax.
Wang Y., Zhang T., Wang R., Zhao Y.
J. Exp. Bot. 2018  69(2)  255-263
Recent advances in auxin research in rice and their implications for crop improvement.
Sun W., Gao D., Xiong Y., Tang X., Xiao X., Wang C., Yu S.
Mol Plant 2017  10(11)  1417-1433
Hairy Leaf 6, an AP2/ERF Transcription Factor, Interacts with OsWOX3B and Regulates Trichome Formation in Rice.
Xu Y., Zong W., Hou X., Yao J., Liu H., Li X., Zhao Y., Xiong L.
Plant J. 2015  83(5)  806-17
OsARID3, an AT-rich Interaction Domain-containing protein, is required for shoot meristem development in rice.
Abu-Zaitoon YM.
Appl. Biochem. Biotechnol. 2014  172(5)  2480-95
Phylogenetic analysis of putative genes involved in the tryptophan-dependent pathway of auxin biosynthesis in rice.
Hirano K., Aya K., Hobo T., Sakakibara H., Kojima M., Rosalyn Angeles Shim, Hasegawa Y., Miyako Ueguchi-Tanaka, Matsuoka M.
Plant & cell physiology 2008  49(10)  1429-50
Comprehensive transcriptome analysis of phytohormone biosynthesis and signaling genes in microspore/pollen and tapetum of rice.
Fujino,K., Matsuda,Y., Ozawa,K., Nishimura,T., Koshiba,T., Fraaije,M.W. and Sekiguchi,H.
Mol. Genet. Genomics 2008  279(5)  499-507
NARROW LEAF 7 controls leaf shape mediated by auxin in rice
Yamamoto Y, Kamiya N, Morinaka Y, Matsuoka M, Sazuka T.
Plant Physiol. 2007  143(3)  1362-1371
Auxin Biosynthesis by the YUCCA Genes in Rice.
TextPresso Search Search textpresso for YUCCA5 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology flavin-containing monooxygenase activity( GO:0004499 )
auxin biosynthetic process( GO:0009851 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Oct 12, 2023

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