Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol YUCCA3
Gene Symbol Synonym OsYUCCA3, OsYUC3, YUC3
CGSNL Gene Name YUCCA-LIKE GENE 3
Gene Name Synonym (YUCCA-like gene)
Protein Name
Allele
Chromosome No. 1
Explanation Os01g0732600 (in Ncbi and UniProt). an orthologue of AtYUCCA.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK243630
MSU ID LOC_Os01g53200.1
RAP ID Os01g0732700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Thenappan D.P., Pandey R., Hada A., Jaiswal D.K., Chinnusamy V., Bhattacharya R., Annapurna K.
Rice (N Y) 2024  17(1)  60
Physiological Basis of Plant Growth Promotion in Rice by Rhizosphere and Endosphere Associated Streptomyces Isolates from India.
Chen R., Xu N., Yu B., Wu Q., Li X., Wang G., Huang J.
Plant Sci. 2020  298  110575
The WUSCHEL-related homeobox transcription factor OsWOX4 controls the primary root elongation by activating OsAUX1 in rice.
Guo T., Wang D., Fang J., Zhao J., Yuan S., Xiao L., Li X.
Int J Mol Sci 2019  20(10) 
Mutations in the Rice <i>OsCHR4</i> Gene, Encoding a CHD3 Family Chromatin Remodeler, Induce Narrow and Rolled Leaves with Increased Cuticular Wax.
Zhang N., Yu H., Yu H., Cai Y., Huang L., Xu C., Xiong G., Meng X., Wang J., Chen H., Liu G., Jing Y., Yuan Y., Liang Y., Li S., Smith S.M., Li J., Wang Y.
Plant Cell 2018  30(7)  1461-1475
A Core Regulatory Pathway Controlling Rice tiller angle Mediated by the <i>LAZY1</i>-Dependent Asymmetric Distribution of Auxin.
Xu Y.X., Xiao M.Z., Liu Y., Fu J.L., He Y., Jiang D.A.
Plant Mol. Biol. 2017   
The small auxin-up RNA OsSAUR45 affects auxin synthesis and transport in rice.
Zhao F.Y.a, Han M.M.a, Zhang S.Y.b, Ren J.a, Hu F.a, Wang X.a
Russian Journal of Plant Physiology 2014  61  608-618
MAPKs as a cross point in H2O2 and auxin signaling under combined cadmium and zinc stress in rice roots
Abu-Zaitoon YM.
Appl. Biochem. Biotechnol. 2014  172(5)  2480-95
Phylogenetic analysis of putative genes involved in the tryptophan-dependent pathway of auxin biosynthesis in rice.
Abu-Zaitoon YM., Bennett K., Normanly J., Nonhebel H.M.
Physiol Plant 2012  146(4)  487-99
A large increase in IAA during development of rice grains correlates with the expression of tryptophan aminotransferase OsTAR1 and a grain-specific YUCCA.
Fujino,K., Matsuda,Y., Ozawa,K., Nishimura,T., Koshiba,T., Fraaije,M.W. and Sekiguchi,H.
Mol. Genet. Genomics 2008  279(5)  499-507
NARROW LEAF 7 controls leaf shape mediated by auxin in rice
Hirano K., Aya K., Hobo T., Sakakibara H., Kojima M., Rosalyn Angeles Shim, Hasegawa Y., Miyako Ueguchi-Tanaka, Matsuoka M.
Plant & cell physiology 2008  49(10)  1429-50
Comprehensive transcriptome analysis of phytohormone biosynthesis and signaling genes in microspore/pollen and tapetum of rice.
Yamamoto Y, Kamiya N, Morinaka Y, Matsuoka M, Sazuka T.
Plant Physiol. 2007  143(3)  1362-1371
Auxin Biosynthesis by the YUCCA Genes in Rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology flavin-containing monooxygenase activity( GO:0004499 )
auxin biosynthetic process( GO:0009851 )
oxidoreductase activity( GO:0016491 )
response to gravity( GO:0009629 )
response to symbiotic bacterium( GO:0009609 )
Trait Ontology gravity response trait( TO:0002693 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Dec 6, 2024

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