Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol YUCCA1
Gene Symbol Synonym OsYUCCA1, OsYUC1, YUC1
CGSNL Gene Name YUCCA-LIKE GENE 1
Gene Name Synonym (YUCCA-like gene)
Protein Name
Allele
Chromosome No. 1
Explanation an orthologue of AtYUCCA.
Trait Class Biochemical character
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK105488
MSU ID LOC_Os01g45760.1
LOC_Os01g45760.2
RAP ID Os01g0645400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Chang S., Chen Y., Jia S., Li Y., Liu K., Lin Z., Wang H., Chu Z., Liu J., Xi C., Zhao H., Han S., Wang Y.
PLoS Genet. 2020  16(10)  e1009157
Auxin apical dominance governed by the OsAsp1-OsTIF1 complex determines distinctive rice caryopses development on different branches.
Piacentini D., Della Rovere F., Sofo A., Fattorini L., Falasca G., Altamura M.M.
Front Plant Sci 2020  11  1182
Nitric Oxide Cooperates With Auxin to Mitigate the Alterations in the root system Caused by Cadmium and Arsenic.
Liu Q., Ting-Ting Chen, Dong-Wang Xiao, Shu-Man Zhao, Ji-Shan Lin, Wang T., Yan-Jie Li, Bing-Kai Hou
Rice (N Y) 2019  12(1)  92
OsIAGT1 Is a Glucosyltransferase Gene Involved in the Glucose Conjugation of Auxins in Rice.
Zeng Y., Wen J., Zhao W., Wang Q., Huang W.
Front Plant Sci 2019  10  1663
Rational Improvement of Rice Yield and cold tolerance by Editing the Three Genes <i>OsPIN5b</i>, <i>GS3</i>, and <i>OsMYB30</i> With the CRISPR-Cas9 System.
Guo T., Chen K., Dong N.Q., Ye W.W., Shan J.X., Lin H.X.
J Integr Plant Biol 2019   
Tillering and small grain 1 dominates the tryptophan aminotransferase family required for local auxin biosynthesis in rice.
Zhang H., Tan X., Li L., He Y., Hong G., Li J., Lin L., Cheng Y., Yan F., Chen J., Sun Z.
Mol. Plant Pathol. 2019  20(8)  1093-1104
Suppression of auxin signalling promotes rice susceptibility to Rice black streaked dwarf virus infection.
Yang C., Liu X., Li D., Zhu X., Wei Z., Feng Z., Zhang L., He J., Mou C., Jiang L., Wan J.
Plant Sci. 2019  288  110239
OsLUGL is involved in the regulating auxin level and OsARFs expression in rice (Oryza sativa L.).
Tong X., Wang Y., Sun A., Bello B.K., Ni S., Zhang J.
Int J Mol Sci 2018  19(12) 
<b>Notched Belly Grain 4, a Novel Allele of Dwarf 11, Regulates grain shape and Seed Germination in Rice (Oryza sativa L.)</b>.
Phule A.S., Barbadikar K.M., Madhav M.S., Senguttuvel P., Babu MBBP., Ananda Kumar P.
3 Biotech 2018  8(9)  383
Genes encoding membrane proteins showed stable expression in rice under aerobic condition: novel set of reference genes for expression studies.
Wang T., Li C., Wu Z., Jia Y., Wang H., Sun S., Mao C., Wang X.
Front Plant Sci 2017  8  1121
Abscisic Acid Regulates Auxin Homeostasis in Rice Root Tips to Promote root hair Elongation.
Xu Y.X., Xiao M.Z., Liu Y., Fu J.L., He Y., Jiang D.A.
Plant Mol. Biol. 2017   
The small auxin-up RNA OsSAUR45 affects auxin synthesis and transport in rice.
Xu Y., Zong W., Hou X., Yao J., Liu H., Li X., Zhao Y., Xiong L.
Plant J. 2015  83(5)  806-17
OsARID3, an AT-rich Interaction Domain-containing protein, is required for shoot meristem development in rice.
Zhao F.Y.a, Han M.M.a, Zhang S.Y.b, Ren J.a, Hu F.a, Wang X.a
Russian Journal of Plant Physiology 2014  61  608-618
MAPKs as a cross point in H2O2 and auxin signaling under combined cadmium and zinc stress in rice roots
Abu-Zaitoon YM.
Appl. Biochem. Biotechnol. 2014  172(5)  2480-95
Phylogenetic analysis of putative genes involved in the tryptophan-dependent pathway of auxin biosynthesis in rice.
Yi J., Liu L., Cao Y., Li J., Mei M.
J. Genet. 2013  92(3)  471-80
Cloning, characterization and expression of OsFMO(t) in rice encoding a flavin monooxygenase.
Sazuka T,Kamiya N,Nishimura T,Ohmae K,Sato Y,Imamura K,Nagato Y,Koshiba T,Nagamura Y,Ashikari M,Kitano H,Matsuoka M
Plant J. 2009  60(2)  227-41
A rice tryptophan deficient dwarf mutant, tdd1, contains a reduced level of indole acetic acid and develops abnormal flowers and organless embryos.
Fujino,K., Matsuda,Y., Ozawa,K., Nishimura,T., Koshiba,T., Fraaije,M.W. and Sekiguchi,H.
Mol. Genet. Genomics 2008  279(5)  499-507
NARROW LEAF 7 controls leaf shape mediated by auxin in rice
Hirano K., Aya K., Hobo T., Sakakibara H., Kojima M., Rosalyn Angeles Shim, Hasegawa Y., Miyako Ueguchi-Tanaka, Matsuoka M.
Plant & cell physiology 2008  49(10)  1429-50
Comprehensive transcriptome analysis of phytohormone biosynthesis and signaling genes in microspore/pollen and tapetum of rice.
Yamamoto Y, Kamiya N, Morinaka Y, Matsuoka M, Sazuka T.
Plant Physiol. 2007  143(3)  1362-1371
Auxin Biosynthesis by the YUCCA Genes in Rice.
TextPresso Search Search textpresso for YUCCA1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to cadmium ion( GO:0046686 )
response to arsenic( GO:0046685 )
defense response to virus( GO:0051607 )
response to anoxia( GO:0034059 )
response to abscisic acid stimulus( GO:0009737 )
flavin-containing monooxygenase activity( GO:0004499 )
auxin biosynthetic process( GO:0009851 )
Trait Ontology black streak dwarf virus resistance( TO:0000020 )
abscisic acid sensitivity( TO:0000615 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 11, 2021


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