Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol SOS1
Gene Symbol Synonym OsSOS1, OsNHA1, NHA1, SOS1/NHX7, NHX7, OsNHX7
Gene Name Synonym Oryza sativa salt overly sensitive 1, Na+/H+ antiporter 1, Sodium/hydrogen antiporter 7
Protein Name
Chromosome No. 12
Explanation AY785147. Oryza sativa subsp. Indica: BGIOSGA035749, Oryza rufipogon: ORUFI12G22630, Oryza nivara: ONIVA12G18960, Oryza glaberrima: ORGLA12G0176700, Oryza barthii: OBART12G20310, Oryza glumipatula: OGLUM12G22080, Oryza punctata: OPUNC12G18600, Oryza brachyantha: OB12G27070.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK100537
MSU ID LOC_Os12g44360.1
RAP ID Os12g0641100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Song J., Yang H., Qiao C., Zhu C., Bai T., Du H., Ma S., Wang N., Luo C., Zhang Y., Ma T., Li P., Tian L.
Front Plant Sci 2023  14  1095929
Natural variations of chlorophyll fluorescence and ion transporter genes influenced the differential response of <i>japonica</i> rice germplasm with different salt tolerances.
Wen D., Bao L., Huang X., Qian X., Chen E., Shen B.
Int J Mol Sci 2022  23(18) 
<i>OsABT</i> Is Involved in Abscisic Acid Signaling Pathway and salt tolerance of Roots at the Rice Seedling Stage.
Solis C.A., Yong M.T., Zhou M., Venkataraman G., Shabala L., Holford P., Shabala S., Chen Z.H.
Int J Mol Sci 2022  23(4) 
Evolutionary Significance of NHX Family and NHX1 in Salinity Stress Adaptation in the Genus <i>Oryza</i>.
Ye Y., Wang S., Wu K., Ren Y., Jiang H., Chen J., Tao L., Fu X., Liu B., Wu Y.
Rice (N Y) 2021  14(1)  19
A Semi-Dominant Mutation in OsCESA9 Improves salt tolerance and Favors Field Straw Decay Traits by Altering Cell Wall Properties in Rice.
Ye S., Huang Z., Zhao G., Zhai R., Ye J., Wu M., Yu F., Zhu G., Zhang X.
Plants (Basel) 2021  10(11) 
Differential Physiological Responses to Salt Stress between Salt-Sensitive and Salt-Tolerant <i>japonica</i> Rice Cultivars at the Post-Germination and Seedling Stages.
Farooq M., Park J.R., Jang Y.H., Kim E.G., Kim K.M.
Front Plant Sci 2021  12  680131
Rice Cultivars Under Salt Stress Show Differential Expression of Genes Related to the Regulation of Na+/K+ Balance.
Kim J.H., Lim S.D., Jang C.S.
Physiol Plant 2021   
Oryza sativa, C4HC3-type really interesting new gene (RING), OsRFPv6, is a positive regulator in response to salt stress by regulating Na+ absorption.
Neang S., Goto I., Skoulding N.S., Cartagena J.A., Kano-Nakata M., Yamauchi A., Mitsuya S.
BMC Plant Biol. 2020  20(1)  502
Tissue-specific expression analysis of Na+ and Cl- transporter genes associated with salt removal ability in rice leaf sheath.
Chakraborty K., Mondal S., Ray S., Samal P., Pradhan B., Chattopadhyay K., Kar M.K., Swain P., Sarkar R.K.
Front Plant Sci 2020  11  265
Tissue Tolerance Coupled With Ionic Discrimination Can Potentially Minimize the Energy Cost of Salinity Tolerance in Rice.
Fang C., Li K., Wu Y., Wang D., Zhou J., Liu X., Li Y., Jin C., Liu X., Mur L.A.J., Luo J.
Plant Cell Environ. 2019  42(5)  1503-1512
OsTSD2-mediated cell wall modification affects ion homeostasis and salt tolerance.
Liu J., Shabala S., Shabala L., Zhou M., Meinke H., Venkataraman G., Chen Z., Zeng F., Zhao Q.
Front Plant Sci 2019  10  1361
Tissue-Specific Regulation of Na+ and K+ Transporters Explains Genotypic Differences in Salinity Stress Tolerance in Rice.
Ijaz B., Formentin E., Ronci B., Locato V., Barizza E., Hyder M.Z., Lo Schiavo F., Yasmin T.
PLoS ONE 2019  14(4)  e0213986
Salt tolerance in indica rice cell cultures depends on a fine tuning of ROS signalling and homeostasis.
Cheng X., Zhang S., Tao W., Zhang X., Liu J., Sun J., Zhang H., Pu L., Huang R., Chen T.
Plant Physiol. 2018  178(2)  824-837
INDETERMINATE SPIKELET1 Recruits Histone Deacetylase and a Transcriptional Repression Complex to Regulate Rice salt tolerance.
Wang Y., Li D., Gao J., Li X., Zhang R., Jin X., Hu Z., Zheng B., Persson S., Chen P.
J. Exp. Bot. 2017   
The 2'-O-methyladenosine nucleoside modification gene OsTrm13 positively regulates salt stress tolerance in rice.
Manimaran P., Venkata Reddy S., Moin M., Raghurami Reddy M., Yugandhar P., Mohanraj S.S., Balachandran S.M., Kirti P.B.
Sci Rep 2017  7(1)  9341
Activation-tagging in indica rice identifies a novel transcription factor subunit, NF-YC13 associated with salt tolerance.
Cui P., Liu H., Islam F., Li L., Farooq M.A., Ruan S., Zhou W.
Front Plant Sci 2016  7  1357
OsPEX11, a Peroxisomal Biogenesis Factor 11, Contributes to Salt Stress Tolerance in Oryza sativa.
Hwang J.E., Jang D.S., Lee K.J., Ahn J.W., Kim S.H., Kang S.Y., Kim D.S., Kim J.B.
Genes Genet. Syst. 2016   
Identification of gamma ray irradiation-induced mutations in membrane transport genes in a rice population by TILLING.
Tripathy M.K., Tiwari B.S., Reddy M.K., Deswal R., Sopory S.K.
Protoplasma 2015   
Ectopic expression of PgRab7 in rice plants (Oryza sativa L.) results in differential tolerance at the vegetative and seed setting stage during salinity and drought stress.
Zhu N., Cheng S., Liu X., Du H., Dai M., Zhou D.X., Yang W., Zhao Y.
Plant Sci. 2015  236  146-56
The R2R3-type MYB gene OsMYB91 has a function in coordinating plant growth and salt stress tolerance in rice.
Sun L.J., Zhang Q., Wu J.X., Zhang L.Q., Jiao X.W., Zhang S.W., Zhang Z.G., Sun D.Y., Lu T.G., Sun Y.
Plant Physiol. 2014  165(1)  335-45
Two rice histidine phosphotransfer proteins, OsAHP1 and OsAHP2, mediate cytokinin signaling and stress responses in rice.
Ke Y.G.a b, Yang Z.J.a, Yu S.W.b, Li T.F.b, Wu J.H.b, Gao H.b, Fu Y.P.c, Luo L.J.a b
Journal of Plant Biology 2014  57  150-161
Characterization of OsDREB6 responsive to osmotic and cold stresses in rice
Yang C., Zhao N., Xu C., Liu B., Shi D.
Aust J Crop Sci 2012  6  724-731
Regulation of ion homeostasis in rice subjected to salt and alkali stresses
Ben Saad R., Fabre D., Mieulet D., Meynard D., Dingkuhn M., Al-Doss A., Guiderdoni E., Hassairi A.
Plant Cell Environ. 2012  35(3)  626-43
Expression of the Aeluropus littoralis AlSAP gene in rice confers broad tolerance to abiotic stresses through maintenance of photosynthesis.
Wang H., Zhang M., Guo R., Shi D., Liu B., Lin X., Yang C.
BMC Plant Biol. 2012  12  194
Effects of salt stress on ion balance and nitrogen metabolism of old and young leaves in rice (Oryza sativa L.).
Wang H., Wu Z., Han J., Zheng W., Yang C.
PLoS ONE 2012  7(5)  e37817
Comparison of ion balance and nitrogen metabolism in old and young leaves of alkali-stressed rice plants.
Zhang C.J., Zhao B.C., Ge W.N., Zhang Y.F., Song Y., Sun D.Y., Guo Y.
Plant Physiol. 2011  157(4)  1884-99
An Apoplastic H-Type Thioredoxin Is Involved in the Stress Response through Regulation of the Apoplastic Reactive Oxygen Species in Rice.
Asano T., Hakata M., Nakamura H., Aoki N., Komatsu S., Ichikawa H., Hirochika H., Ohsugi R.
Plant Mol. Biol. 2011  75(1)  179-191
Functional characterisation of OsCPK21, a calcium-dependent protein kinase that confers salt tolerance in rice.
Martinez-Atienza,J., Jiang,X., Garciadeblas,B., Mendoza,I., Zhu,J.K., Pardo,J.M. and Quintero,F.J.
Plant Physiol. 2007  143(2)  1001-1012
Conservation of the Salt Overly Sensitive Pathway in Rice
Zhou,G.A., Jiang,Y., Yang,Q., Wang,J.F., Huang,J. and Zhang,H.S.
DNA Seq. 2006  17(1)  24-30
Isolation and characterization of a new Na+/H+ antiporter gene OsNHA1 from rice (Oryza sativa L.).
TextPresso Search Search textpresso for SOS1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology sodium ion homeostasis( GO:0055078 )
potassium ion homeostasis( GO:0055075 )
lithium ion export( GO:0010352 )
high-affinity potassium ion import( GO:0010163 )
chloroplast envelope( GO:0009941 )
sodium ion transport( GO:0006814 )
response to salt stress( GO:0009651 )
plasma membrane( GO:0005886 )
lithium:hydrogen antiporter activity( GO:0010348 )
response to water deprivation( GO:0009414 )
transmembrane transport( GO:0055085 )
sodium:hydrogen antiporter activity( GO:0015385 )
integral to membrane( GO:0016021 )
response to hydrogen peroxide( GO:0042542 )
Trait Ontology salt tolerance( TO:0006001 )
drought tolerance( TO:0000276 )
Plant Ontology root tip( PO:0000025 )
root( PO:0009005 )
leaf( PO:0025034 )
leaf sheath( PO:0020104 )
shoot system( PO:0009006 )
Related Strains
Phenotype images
Last updated
Jun 26, 2023