Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol MIR156B
Gene Symbol Synonym miR156b, OsmiR156b, osmiR156b, osa-miR156b, osa-MIR156b, miR156b*osa-miR156b-3p osa-miR156b-5p
CGSNL Gene Name MICRORNA156B
Gene Name Synonym micro RNA 156b, microRNA156b, osa-miRNA156b
Protein Name
Allele
Chromosome No. 1
Explanation OsmiR156b and OsmiR156c are mapped to the same transcription unit (accession no. AK110797). miRBase accession: MI0000654. PO:0000009; cultured callus ; PO:0009049; inflorescence ; PO:0009005; root ; PO:0009025; leaf. GRO:0007047; 02-seedling ; GRO:0007192; callus promotion ; GRO:0007193; plantlet regeneration. target gene(s): SPL (Squamosa Promoter binding protein Like) gene family. EU004233-EU004275 (Japonica, Indica and O. rufipogon)LM383043 LM379142
Trait Class Tolerance and resistance - Disease resistance
Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Zhang D., Liu M., Tang M., Dong B., Wu D., Zhang Z., Zhou B.
Plant Sci. 2015  237  24-32
Repression of microRNA biogenesis by silencing of OsDCL1 activates the basal resistance to Magnaporthe oryzae in rice.
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011  23(12)  4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011  39  D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
Wang S,Zhu QH,Guo X,Gui Y,Bao J,Helliwell C,Fan L
FEBS Lett. 2007  581  4789-93
Molecular evolution and selection of a gene encoding two tandem microRNAs in rice.
Xie K, Wu C, Xiong L.
Plant Physiol. 2006  142(1)  280-293
Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice.
Luo YC,Zhou H,Li Y,Chen JY,Yang JH,Chen YQ,Qu LH
FEBS Lett. 2006  580  5111-6
Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development.
TextPresso Search Search textpresso for MIR156B ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0100702
Ontologies
Gene Ontology mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
micro-ribonucleoprotein complex( GO:0035068 )
gene silencing by miRNA( GO:0035195 )
defense response to fungus( GO:0050832 )
Trait Ontology blast disease( TO:0000074 )
Plant Ontology cultured plant callus( PO:0000009 )
root( PO:0009005 )
vascular leaf( PO:0009025 )
inflorescence( PO:0009049 )
Related Strains
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Phenotype images
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Last updated
Oct 8, 2015


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