Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CIPK30
Gene Symbol Synonym OsCIPK30, OsSnRK3.5, SnRK3.5
CGSNL Gene Name CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 30
Gene Name Synonym CBL-interacting protein kinase 30, Sucrose nonfermenting-1-related protein kinase 3.5
Protein Name CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 30
Allele
Chromosome No. 1
Explanation EC=2.7.11.1 Q5JLQ9.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK069231
MSU ID LOC_Os01g55440.1
RAP ID Os01g0759200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Chen Z., Zhou L., Jiang P., Lu R., Halford N.G., Liu C.
BMC Genomics 2021  22(1)  300
Genome-wide identification of sucrose nonfermenting-1-related protein kinase (SnRK) genes in barley and RNA-seq analyses of their expression in response to abscisic acid treatment.
Ye N.H., Wang F.Z., Shi L., Chen M.X., Cao Y.Y., Zhu F.Y., Wu Y.Z., Xie L.J., Liu T.Y., Su Z.Z., Xiao S., Zhang H., Yang J., Gu H.Y., Hou X.X., Hu Q.J., Yi H.J., Zhu C.X., Zhang J., Liu Y.G.
Plant J. 2018  94(4)  612-625
Natural variation in the promoter of rice calcineurin B-like protein10 (OsCBL10) affects flooding tolerance during seed germination among rice subspecies.
Kanwar P., Sanyal S.K., Tokas I., Yadav A.K., Pandey A., Kapoor S., Pandey G.K.
Cell Calcium 2014  56(2)  81-95
Comprehensive structural, interaction and expression analysis of CBL and CIPK complement during abiotic stresses and development in rice.
Xiang Y,Huang Y,Xiong L
Plant Physiol. 2007  144  1416-28
Characterization of stress-responsive CIPK genes in rice for stress tolerance improvement.
Kolukisaoglu U., Weinl S., Blazevic D., Batistic O., Jörg Kudla
Plant Physiol. 2004  134(1)  43-58
Calcium sensors and their interacting protein kinases: genomics of the Arabidopsis and rice CBL-CIPK signaling networks.
TextPresso Search Search textpresso for CIPK30 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology manganese ion binding( GO:0030145 )
protein serine/threonine kinase activity( GO:0004674 )
ATP binding( GO:0005524 )
protein amino acid phosphorylation( GO:0006468 )
signal transduction( GO:0007165 )
response to flooding( GO:0009413 )
Trait Ontology flooding related trait( TO:0000114 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Sep 9, 2021

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