Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol GID1
Gene Symbol Synonym gid1, OsGID1, Thl, Os GID1
Gene Name Synonym GIBBERELLIN-INSENSITIVE DWARF1, Gibberellin receptor GID1, Gibberellin-insensitive dwarf protein 1, Protein GIBBERELLIN INSENSITIVE DWARF1, Thumbelina, GA-insensitive dwarf 1
Allele gid1, gid1-1,gid1-2, gid1-3, gid1-4, gid1-7, gid1-8, thl-m
Chromosome No. 5
Explanation SOLUBLE GA RECEPTOR. Gibberellin receptor protein. EC=3.-.-.- Q6L545. GRO:0007001; rice plant growth stage. GO:2000377: regulation of reactive oxygen species metabolic process.
Trait Class Vegetative organ - Culm
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK074026
MSU ID LOC_Os05g33730.1
RAP ID Os05g0407500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Yang B., Chen M., Zhan C., Liu K., Cheng Y., Xie T., Zhu P., He Y., Zeng P., Tang H., Tsugama D., Chen S., Zhang H., Cheng J.
J. Exp. Bot. 2022   
Identification of OsPK5 involved in rice glycolytic metabolism and GA/ABA balance for improving seed germination via GWAS.
Yano K., Morinaka Y., Wang F., Huang P., Takehara S., Hirai T., Ito A., Koketsu E., Kawamura M., Kotake K., Yoshida S., Endo M., Tamiya G., Kitano H., Ueguchi-Tanaka M., Hirano K., Matsuoka M.
Proc. Natl. Acad. Sci. U.S.A. 2019  116(42)  21262-21267
GWAS with principal component analysis identifies a gene comprehensively controlling rice architecture.
Ke S., Liu S., Luan X., Xie X.M., Hsieh T.F., Zhang X.Q.
Rice (N Y) 2019  12(1)  7
Mutation in a putative glycosyltransferase-like gene causes programmed cell death and early leaf senescence in rice.
Yoshida H., Tanimoto E., Hirai T., Miyanoiri Y., Mitani R., Kawamura M., Takeda M., Takehara S., Hirano K., Kainosho M., Akagi T., Matsuoka M., Ueguchi-Tanaka M.
Proc. Natl. Acad. Sci. U.S.A. 2018  115(33)  E7844-E7853
Evolution and diversification of the plant gibberellin receptor GID1.
Burman N., Bhatnagar A., Khurana J.P.
Plant Physiol. 2017   
OsbZIP48, a HY5 transcription factor ortholog, exerts pleiotropic effects in light-regulated development.
Liu G., Zhang K., Ai J., Su Y., Deng X., Hong Y., Wang X.
J. Exp. Bot. 2015   
Patatin-related phospholipase A, pPLAIIIalpha, modulates the longitudinal growth of vegetative tissues and seeds in rice.
Du H., Chang Y., Huang F., Xiong L.
J Integr Plant Biol 2014   
gid1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice.
Tong H.a, Xiao Y.a, Liu D.a, Gao S.a, Liu L.a, Yin Y.b, Jin Y.c, Qian Q.d, Chu C.a
Plant Cell 2014  26  4376-4393
Brassinosteroid regulates cell elongation by modulating gibberellin metabolism in ricec w open
Jung K.H., Kim S.R., Giong H.K., Nguyen M.X., Go H.J., An G.
Mol Plant 2014   
Genome-wide Identification and Functional Analysis of Genes Expressed Ubiquitously in Rice.
Yang D.L., Yang Y., He Z.
Mol Plant 2013  6(3)  675-85
Role of plant hormones and their cross-talks in rice immunity.
Nakamura H., You-Lin Xue, Miyakawa T., Hou F., Hui-Min Qin, Fukui K., Shi X., Ito E., Ito S., Seung-Hyun Park, Miyauchi Y., Asano A., Totsuka N., Ueda T., Tanokura M., Asami T.
Nat Commun 2013  4  2613
Molecular mechanism of strigolactone perception by DWARF14.
Zhang C.C., Yuan W.Y., Zhang Q.F.
Mol Plant 2012  5(2)  482-93
RPL1, a Gene Involved in Epigenetic Processes Regulates Phenotypic Plasticity in Rice.
Hirose F., Inagaki N., Hanada A., Yamaguchi S., Kamiya Y., Miyao A., Hirochika H., Takano M.
Plant Cell Physiol. 2012  53(9)  1570-82
Cryptochrome and Phytochrome Cooperatively but Independently Reduce Active Gibberellin Content in Rice Seedlings under Light Irradiation.
Hirano K., Kouketu E., Katoh H., Aya K., Ueguchi-Tanaka M., Matsuoka M.
Plant J. 2012  71(3)  443-53
The Suppressive Function of the Rice DELLA Protein SLR1 is Dependent on its Transcriptional Activation Activity.
Amber L Hauvermale, Ariizumi T., Camille M Steber
Plant Physiol. 2012  160(1)  83-92
Gibberellin signaling: a theme and variations on DELLA repression.
Wang F., Xing Wang Deng
Cell Res. 2011  21(9)  1286-94
Plant ubiquitin-proteasome pathway and its role in gibberellin signaling.
Xiang H., Takeuchi H., Tsunoda Y., Nakajima M., Murata K., Ueguchi-Tanaka M., Kidokoro S.I., Kezuka Y., Nonaka T., Matsuoka M., Katoh E.
Journal of Molecular Recognition 2011  24  275-282
Thermodynamic characterization of OsGID1-gibberellin binding using calorimetry and docking simulations
Tang X., Zhang Z.-Y., Zhang W.-J., Zhao X.-M., Li X., Zhang D., Liu Q.-Q., Tang W.-H.
Plant Physiol. 2010  154(4)  1855-1870
Global gene profiling of laser-captured pollen mother cells indicates molecular pathways and gene subfamilies involved in rice meiosis.
Aya K,Ueguchi-Tanaka M,Kondo M,Hamada K,Yano K,Nishimura M,Matsuoka M
Plant Cell 2009  21  1453-72
Gibberellin modulates anther development in rice via the transcriptional regulation of GAMYB.
Chhun T,Aya K,Asano K,Yamamoto E,Morinaka Y,Watanabe M,Kitano H,Ashikari M,Matsuoka M,Ueguchi-Tanaka M
Plant Cell 2007  19  3876-88
Gibberellin regulates pollen viability and pollen tube growth in rice.
Eckardt NA
Plant Cell 2007  19  2095-7
GA perception and signal transduction: molecular interactions of the GA receptor GID1 with GA and the DELLA protein SLR1 in rice.
Hirano K,Nakajima M,Asano K,Nishiyama T,Sakakibara H,Kojima M,Katoh E,Xiang H,Tanahashi T,Hasebe M,Banks JA,Ashikari M,Kitano H,Ueguchi-Tanaka M,Matsuoka M
Plant Cell 2007  19  3058-79
The GID1-mediated gibberellin perception mechanism is conserved in the Lycophyte Selaginella moellendorffii but not in the Bryophyte Physcomitrella patens.
Ueguchi-Tanaka,M., Nakajima,M., Katoh,E., Ohmiya,H., Asano,K., Saji,S., Hongyu,X., Ashikari,M., Kitano,H., Yamaguchi,I. and Matsuoka,M.
Plant Cell 2007  19(7)  2140-2155
Molecular interactions of a soluble gibberellin receptor, GID1, with a rice DELLA protein, SLR1, and gibberellin
Tsugane,K., Maekawa,M., Takagi,K., Takahara,H., Qian,Q., Eun,C.H. and Iida,S.
Plant J. 2006  45(1)  46-57
An active DNA transposon nDart causing leaf variegation and mutable dwarfism and its related elements in rice.
Hartweck LM, Olszewski NE.
Plant Cell 2006  18(2)  278-82
Rice GIBBERELLIN INSENSITIVE DWARF1 is a gibberellin receptor that illuminates and raises questions about GA signaling.
Tanaka N,Matsuoka M,Kitano H,Asano T,Kaku H,Komatsu S
Plant Cell Environ. 2006  29  619-31
gid1, a gibberellin-insensitive dwarf mutant, shows altered regulation of probenazole-inducible protein (PBZ1) in response to cold stress and pathogen attack.
Ueguchi-Tanaka,M., Ashikari,M., Nakajima,M., Itoh,H., Katoh,E., Kobayashi,M., Chow,T., Hsing,Y.C., Kitano,H., Yamaguchi,I. and Matsuoka,M.
Nature 2005  437(7059)  693-698
GIBBERELLIN INSENSITIVE DWARF1 encodes a soluble receptor for gibberellin.
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DB Reference
Gramene ID GR:0020050
Gene Ontology gibberellic acid mediated signaling( GO:0009740 )
nucleus( GO:0005634 )
metabolic process( GO:0008152 )
response to gibberellin stimulus( GO:0009739 )
receptor activity( GO:0004872 )
response to water deprivation( GO:0009414 )
abscisic acid mediated signaling( GO:0009738 )
regulation of chlorophyll catabolic process( GO:0010271 )
regulation of abscisic acid biosynthetic process( GO:0010115 )
regulation of carbohydrate metabolic process( GO:0006109 )
sclerenchyma cell differentiation( GO:0014001 )
regulation of stomatal complex patterning( GO:2000037 )
regulation of stomatal complex development( GO:2000038 )
hydrolase activity( GO:0016787 )
response to cold( GO:0009409 )
defense response to fungus( GO:0050832 )
Trait Ontology cold tolerance( TO:0000303 )
bacterial blight disease resistance( TO:0000175 )
gibberellic acid sensitivity( TO:0000166 )
plant height( TO:0000207 )
drought tolerance( TO:0000276 )
abscisic acid sensitivity( TO:0000615 )
submergence sensitivity( TO:0000286 )
stomatal frequency( TO:0000566 )
chlorophyll content( TO:0000495 )
carbohydrate content( TO:0000291 )
vascular tissue related trait( TO:0000470 )
blast disease( TO:0000074 )
leaf length( TO:0000135 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Jul 1, 2022