Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol ABA1
Gene Symbol Synonym OsABA1, Zep1, OsAba1, Aba2, OsAba2, OsZep1, Zep, OsZep, Aba1, OsABA2, Osaba1, OsZEP-1, OsZEP, OSZEP1, ZEP1, ZEP
Gene Name Synonym Zeaxanthin epoxidase 1, zeaxanthin epoxidase, abscisic acid-deficient 1, zeaxanthin cyclooxygenases
Allele Osaba1, Osaba1-6, Osaba1-13, Osaba1-14, Osaba1-15
Chromosome No. 4
Explanation AB050884. ABA2 in Jin et al. 2018, Shen et al. 2019. GO:1990069: stomatal opening. GO:1901827: zeaxanthin biosynthetic process.
Trait Class Biochemical character
Vegetative organ - Leaf
Vegetative organ - Culm
Vegetative organ - Root
Coloration - Others
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
cDNA Accession No. AB050884
MSU ID LOC_Os04g37619.1
RAP ID Os04g0448900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Zhu X., Chen L., Zhang Z., Li J., Zhang H., Li Z., Pan Y., Wang X.
BMC Plant Biol. 2023  23(1)  396
Genetic-based dissection of resistance to bacterial leaf streak in rice by GWAS.
Jardim-Messeder D., Caverzan A., Balbinott N., Menguer P.K., Paiva A.L.S., Lemos M., Cunha J.R., Gaeta M.L., Costa M., Zamocky M., Saibo N.J.M., Silveira J.A.G., Margis R., Margis-Pinheiro M.
Antioxidants (Basel) 2023  12(2) 
Stromal Ascorbate Peroxidase (<i>OsAPX7</i>) Modulates Drought Stress Tolerance in Rice (<i>Oryza sativa</i>).
Yan J., Ninkuu V., Fu Z., Yang T., Ren J., Li G., Yang X., Zeng H.
Front Plant Sci 2023  14  1163939
OsOLP1 contributes to drought tolerance in rice by regulating ABA biosynthesis and lignin accumulation.
Long Q., Qiu S., Man J., Ren D., Xu N., Luo R.
Rice (N Y) 2023  16(1)  35
OsAAI1 Increases Rice Yield and drought tolerance Dependent on ABA-Mediated Regulatory and ROS Scavenging Pathway.
He Y., Chen S., Liu K., Chen Y., Cheng Y., Zeng P., Zhu P., Xie T., Chen S., Zhang H., Cheng J.
Plant Biotechnol. J. 2022  20(7)  1346-1362
OsHIPL1, a hedgehog-interacting protein-like 1 protein, increases seed vigour in rice.
Yang B., Chen M., Zhan C., Liu K., Cheng Y., Xie T., Zhu P., He Y., Zeng P., Tang H., Tsugama D., Chen S., Zhang H., Cheng J.
J. Exp. Bot. 2022   
Identification of OsPK5 involved in rice glycolytic metabolism and GA/ABA balance for improving seed germination via GWAS.
Hao Q., Zhang G., Zuo X., He Y., Zeng H.
Int J Mol Sci 2022  23(15) 
Cia Zeaxanthin Biosynthesis, <i>OsZEP</i> and <i>OsVDE</i> Regulate Striped Leaves Occurring in Response to Deep Transplanting of Rice.
Da Costa MVJ., Ramegowda V., Sreeman S., Nataraja K.N.
Int J Mol Sci 2021  22(21) 
Targeted Phytohormone Profiling Identifies Potential Regulators of spikelet sterility in Rice under Combined Drought and Heat Stress.
Desai J.S., Lawas L.M.F., Valente A.M., Leman A.R., Grinevich D.O., Jagadish S.V.K., Doherty C.J.
Proc. Natl. Acad. Sci. U.S.A. 2021  118(25) 
Warm nights disrupt transcriptome rhythms in field-grown rice panicles.
Yu J., Mao C., Zhong Q., Yao X., Li P., Liu C., Ming F.
Front Plant Sci 2021  12  699303
OsNAC2 Is Involved in Multiple Hormonal Pathways to Mediate Germination of Rice Seeds and Establishment of Seedling.
Kim S., Park S.I., Kwon H., Cho M.H., Kim B.G., Chung J.H., Nam M.H., Song J.S., Kim K.H., Yoon I.S.
Front Plant Sci 2021  12  797940
The Rice Abscisic Acid-Responsive RING Finger E3 ligase OsRF1 Targets OsPP2C09 for Degradation and Confers Drought and Salinity Tolerance in Rice.
Shanmugam S., Boyett V.A., Khodakovskaya M.
PLoS ONE 2021  16(10)  e0258171
Enhancement of drought tolerance in rice by silencing of the OsSYT-5 gene.
Shen Q., Zhan X., Yang P., Li J., Chen J., Tang B., Wang X., Hong Y.
Plant Cell 2019  31(12)  3073-3091
Dual Activities of Plant cGMP-dependent protein kinase and Its Roles in Gibberellin Signaling and Salt Stress.
Verma R.K., Santosh Kumar VV., Yadav S.K., Pushkar S., Rao M.V., Chinnusamy V.
Front Plant Sci 2019  10  1488
Overexpression of ABA Receptor <i>PYL10</i> Gene Confers Drought and Cold Tolerance to Indica Rice.
Zhang D., Tian C., Yin K., Wang W., Qiu J.L.
Mol. Plant Microbe Interact. 2019  32(2)  255-266
Postinvasive Bacterial Resistance Conferred by Open Stomata in Rice.
Jin Y., Pan W., Zheng X., Cheng X., Liu M., Ma H., Ge X.
Plant Mol. Biol. 2018  98(1-2)  51-65
OsERF101, an ERF family transcription factor, regulates drought stress response in reproductive tissues.
He Y., Li L., Zhang Z., Wu J.L.
Int J Mol Sci 2018  19(1) 
Identification and Comparative Analysis of Premature Senescence Leaf Mutants in Rice (Oryza sativa L.).
Bollinedi H., S GK., Prabhu K.V., Singh N.K., Mishra S., Khurana J.P., Singh A.K.
PLoS ONE 2017  12(1)  e0169600
Molecular and Functional Characterization of GR2-R1 Event Based Backcross Derived Lines of Golden Rice in the Genetic Background of a Mega Rice Variety Swarna.
Ahmed M.M.S., Ji W., Wang M., Bian S., Xu M., Wang W., Zhang J., Xu Z., Yu M., Liu Q., Zhang C., Zhang H., Tang S., Gu M., Yu H.
Gene 2017   
Transcriptional changes of rice in response to rice black-streaked dwarf virus.
Mao C., Lu S., Lv B., Zhang B., Shen J., He J., Luo L., Xi D., Chen X., Ming F.
Plant Physiol. 2017  174(3)  1747-1763
A Rice NAC Transcription Factor Promotes leaf senescence via ABA Biosynthesis.
Wang Y., Li D., Gao J., Li X., Zhang R., Jin X., Hu Z., Zheng B., Persson S., Chen P.
J. Exp. Bot. 2017   
The 2'-O-methyladenosine nucleoside modification gene OsTrm13 positively regulates salt stress tolerance in rice.
Tian C., Zuo Z., Qiu J.L.
J Genet Genomics 2015  42(7)  393-402
Identification and Characterization of ABA-Responsive MicroRNAs in Rice.
Zeng D.E.a b, Hou P.a, Xiao F.c, Liu Y.a d
Journal of Plant Biology 2014  57  357-365
Overexpressing a novel RING-H2 finger protein gene, OsRHP1, enhances drought and salt tolerance in rice (Oryza sativa L.)
Liang C., Wang Y., Zhu Y., Tang J., Hu B., Liu L., Ou S., Wu H., Sun X., Chu J., Chu C.
Proc. Natl. Acad. Sci. U.S.A. 2014  111(27)  10013-8
OsNAP connects abscisic acid and leaf senescence by fine-tuning abscisic acid biosynthesis and directly targeting senescence-associated genes in rice.
Teng K., Li J., Liu L., Han Y., Du Y., Zhang J., Sun H., Zhao Q.
Acta Physiologiae Plantarum 2014  36  2219-2227
Exogenous ABA induces drought tolerance in upland rice: The role of chloroplast and ABA biosynthesis-related gene expression on photosystem II during PEG stress
Fukumoto T., Kano A., Ohtani K., Inoue M., Yoshihara A., Izumori K., Tajima S., Shigematsu Y., Tanaka K., Ohkouchi T., Ishida Y., Nishizawa Y., Tada Y., Ichimura K., Gomi K., Yoo S.D., Sheen J., Akimitsu K.
Planta 2013  237(5)  1379-91
Phosphorylation of D-allose by hexokinase involved in regulation of OsABF1 expression for growth inhibition in Oryza sativa L.
Liu H., Li X., Xiao J., Wang S.
Plant Methods 2012  8(1)  2
A convenient method for simultaneous quantification of multiple phytohormones and metabolites: application in study of rice-bacterium interaction.
Ji X. , Dong B. , Shiran B. , Talbot M.J. , Edlington J.E. , Hughes T. , White R.G. , Gubler F. , Dolferus R.
Plant Physiol. 2011  156(2)  647-62
Control of abscisic Acid catabolism and abscisic Acid homeostasis is important for reproductive stage stress tolerance in cereals.
Mahmoud W Yaish, Ashraf El-Kereamy, Zhu T., Perrin H Beatty, Allen G Good, Yong-Mei Bi, Steven J Rothstein
PLoS Genet. 2010  6(9)  e1001098
The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice.
Welsch,R., Wust,F., Bar,C., Al-Babili,S. and Beyer,P.
Plant Physiol. 2008  147(1)  367-380
A third phytoene synthase is devoted to abiotic stress-induced abscisic acid formation in rice and defines functional diversification of phytoene synthase genes
Oliver SN,Dennis ES,Dolferus R
Plant Cell Physiol. 2007  48  1319-30
ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice.
Saika,H., Okamoto,M., Miyoshi,K., Kushiro,T., Shinoda,S., Jikumaru,Y., Fujimoto,M., Arikawa,T., Takahashi,H., Ando,M., Arimura,S., Miyao,A., Hirochika,H., Kamiya,Y., Tsutsumi,N., Nambara,E. and Nakazono,M.
Plant Cell Physiol. 2007  48(2)  287-298
Ethylene Promotes Submergence-Induced Expression of OsABA8ox1, a Gene that Encodes ABA 8'-Hydroxylase in Rice.
Agrawal,G.K., Yamazaki,M., Kobayashi,M., Hirochika,R., Miyao,A. and Hirochika,H.
Plant Physiol. 2001  125(3)  1248-1257
Screening of the rice viviparous mutants generated by endogenous retrotransposon Tos17 insertion. Tagging of a zeaxanthin epoxidase gene and a novel ostatc gene.
TextPresso Search Search textpresso for ABA1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0101186
Gene Ontology carotenoid biosynthetic process( GO:0016117 )
response to heat( GO:0009408 )
response to water deprivation( GO:0009414 )
cellular aromatic compound metabolic process( GO:0006725 )
circadian rhythm( GO:0007623 )
abscisic acid mediated signaling( GO:0009738 )
stomatal movement( GO:0010118 )
response to salt stress( GO:0009651 )
xanthophyll biosynthetic process( GO:0016123 )
response to abscisic acid stimulus( GO:0009737 )
plastid( GO:0009536 )
metabolic process( GO:0008152 )
monooxygenase activity( GO:0004497 )
electron transport chain( GO:0022900 )
abscisic acid biosynthetic process( GO:0009688 )
response to temperature stimulus( GO:0009266 )
temperature compensation of the circadian clock( GO:0010378 )
zeaxanthin epoxidase activity( GO:0009540 )
defense response to bacterium( GO:0042742 )
oxidoreductase activity( GO:0016491 )
defense response to virus( GO:0051607 )
Trait Ontology abscisic acid concentration( TO:0000478 )
leaf color( TO:0000326 )
abscisic acid sensitivity( TO:0000615 )
viral disease resistance( TO:0000148 )
black streak dwarf virus resistance( TO:0000020 )
bacterial leaf streak disease resistance( TO:0000203 )
leaf water potential( TO:0000131 )
bacterial blight disease resistance( TO:0000175 )
vivipary( TO:0000619 )
salt tolerance( TO:0006001 )
stomatal conductance( TO:0000522 )
abscisic acid content( TO:0002667 )
temperature response trait( TO:0000432 )
root length( TO:0000227 )
plant height( TO:0000207 )
leaf length( TO:0000135 )
drought tolerance( TO:0000276 )
heat tolerance( TO:0000259 )
Plant Ontology shoot system( PO:0009006 )
vascular leaf( PO:0009025 )
Related Strains
Phenotype images
Last updated
Nov 23, 2023