Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PCL1
Gene Symbol Synonym OsPCL1, OsLUX, LUX
CGSNL Gene Name PHYTOCLOCK 1
Gene Name Synonym PCL1 homolog
Protein Name
Allele
Chromosome No. 1
Explanation AY581256. AB206578. Q94DH3. Circadian clock-associated gene.
Trait Class Heterochrony
Expression
Sequence/Locus
cDNA Accession No. AY581256
MSU ID LOC_Os01g74020.1
RAP ID Os01g0971800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Wei H., Wang X., He Y., Xu H., Wang L.
EMBO J. 2021  40(3)  e105086
Clock component OsPRR73 positively regulates rice salt tolerance by modulating OsHKT2;1-mediated sodium homeostasis.
Matsuzaki J., Kawahara Y., Izawa T.
Plant Cell 2015  27(3)  633-48
Punctual Transcriptional Regulation by the Rice Circadian Clock under Fluctuating Field Conditions.
Suzuki K., Aoki N., Matsumura H., Okamura M., Ohsugi R., Shimono H.
Plant Cell Environ. 2014   
Cooling water before panicle initiation increases chilling-induced male sterility and disables chilling-induced expression of genes encoding OsFKBP65 and heat shock proteins in rice spikelets.
Murakami M, Tago Y, Yamashino T, Mizuno T.
Plant Cell Physiol. 2007  48(1)  110-21
Comparative Overviews of Clock-Associated Genes of Arabidopsis thaliana and Oryza sativa.
Onai,K. and Ishiura,M.
Genes Cells 2005  10(10)  963-972
PHYTOCLOCK 1 encoding a novel GARP protein essential for the Arabidopsis circadian clock.
TextPresso Search Search textpresso for PCL1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology circadian rhythm( GO:0007623 )
chromatin binding( GO:0003682 )
nucleus( GO:0005634 )
regulation of transcription, DNA-dependent( GO:0006355 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 8, 2021


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