Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol NCED3
Gene Symbol Synonym OSNCED3, OsNCED-3, OsNCED3, OsNCED4, NCED4, OsNECD2
CGSNL Gene Name 9-CIS-EPOXYCAROTENOID DIOXYGENASE 3
Gene Name Synonym 9-cis-epoxycarotenoid dioxygenase 3
Protein Name 9-CIS-EPOXYCAROTENOID DIOXYGENASE 3
Allele
Chromosome No. 7
Explanation AP005632. AY838900. OsNCED4 in Welsch et al. 2008, Xu et al. 2013, Liang et al. 2014, Teng et al. 2014, Xiong et al. 2014, Du et al. 2015, Liu et al. 2016, Zhao et al. 2016, Hong et al. 2016, Zong et al. 2016, He et al. 2018, Fu et al. 2018, Zhang et al. 2018, Gong et al. 2019, Kim et al. 2019, Liang et al. 2019, Liu et al. 2019, Cao et al. 2020, Suriyasak et al. 2020. an ABA biosynthesis gene. OsNECD2 in Du et al. 2015.
Trait Class Biochemical character
Seed - Physiological traits - Dormancy
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK119780
MSU ID LOC_Os07g05940.1
RAP ID Os07g0154100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Suriyasak C., Oyama Y., Ishida T., Mashiguchi K., Yamaguchi S., Hamaoka N., Iwaya-Inoue M., Ishibashi Y.
Sci Rep 2020  10(1)  17378
Mechanism of delayed seed germination caused by high temperature during grain filling in rice (Oryza sativa L.).
Cao X., Wu L., Wu M., Zhu C., Jin Q., Zhang J.
BMC Plant Biol. 2020  20(1)  198
Abscisic acid mediated proline biosynthesis and antioxidant ability in roots of two different rice genotypes under hypoxic stress.
Jiang D., Zhou L., Chen W., Ye N., Xia J., Zhuang C.
Rice (N Y) 2019  12(1)  76
Overexpression of a microRNA-targeted NAC transcription factor improves drought and salt tolerance in Rice via ABA-mediated pathways.
Kim T., Kang K., Kim S.H., An G., Paek N.C.
Int J Mol Sci 2019  20(18) 
OsWRKY5 Promotes Rice leaf senescence via Senescence-Associated NAC and Abscisic Acid Biosynthesis Pathway.
Liang S., Xiong W., Yin C., Xie X., Jin Y.J., Zhang S., Yang B., Ye G., Chen S., Luan W.J.
Front Plant Sci 2019  10  1088
Overexpression of <i>OsARD1</i> Improves Submergence, Drought, and Salt Tolerances of Seedling Through the Enhancement of Ethylene Synthesis in Rice.
Liu J., Sun X., Liao W., Zhang J., Liang J., Xu W.
Rice (N Y) 2019  12(1)  82
Involvement of OsGF14b Adaptation in the Drought Resistance of Rice Plants.
Gong P., Luo Y., Huang F., Chen Y., Zhao C., Wu X., Li K., Yang X., Cheng F., Xiang X., Wu C., Pan G.
Plant Mol. Biol. 2019  100(1-2)  133-149
Disruption of a Upf1-like helicase-encoding gene OsPLS2 triggers light-dependent premature leaf senescence in rice.
He Y., Li L., Zhang Z., Wu J.L.
Int J Mol Sci 2018  19(1) 
Identification and Comparative Analysis of Premature Senescence Leaf Mutants in Rice (Oryza sativa L.).
Yuenyong W., Chinpongpanich A., Comai L., Chadchawan S., Buaboocha T.
BMC Plant Biol. 2018  18(1)  335
Downstream components of the calmodulin signaling pathway in the rice salt stress response revealed by transcriptome profiling and target identification.
Zhang D., Wang Y., Shen J., Yin J., Li D., Gao Y., Xu W., Liang J.
Rice (N Y) 2018  11(1)  45
OsRACK1A, encodes a circadian clock-regulated WD40 protein, negatively affect salt tolerance in rice.
Fu J., Wu H., Ma S., Xiang D., Liu R., Xiong L.
Front Plant Sci 2017  8  2108
OsJAZ1 Attenuates Drought Resistance by Regulating JA and ABA Signaling in Rice.
Hong Y., Zhang H., Huang L., Li D., Song F.
Front Plant Sci 2016  7  4
Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and salt tolerance in Rice.
Zong W., Tang N., Yang J., Peng L., Ma S., Xu Y., Li G., Xiong L.
Plant Physiol. 2016  171(4)  2810-25
Feedback Regulation of ABA Signaling and Biosynthesis by a bZIP Transcription Factor Targets Drought-Resistance-Related Genes.
Zhao J., Li M., Gu D., Liu X., Zhang J., Wu K., Zhang X., Teixeira da Silva JA., Duan J.
Biochem. Biophys. Res. Commun. 2016  470(2)  439-44
Involvement of rice histone deacetylase HDA705 in seed germination and in response to ABA and abiotic stresses.
Liu J., Zhang C., Wei C., Liu X., Wang M., Yu F., Xie Q., Tu J.
Plant Physiol. 2016  170(1)  429-43
The RING Finger Ubiquitin E3 Ligase OsHTAS Enhances heat tolerance by Promoting H2O2-Induced Stomatal Closure in Rice.
Du W., Cheng J., Cheng Y., Wang L., He Y., Wang Z., Zhang H.
Plant Biol (Stuttg) 2015   
Physiological characteristics and related gene expression of after-ripening on seed dormancy release in rice.
Xiong H., Li J., Liu P., Duan J., Zhao Y., Guo X., Li Y., Zhang H., Ali J., Li Z.
PLoS ONE 2014  9(3)  e92913
Overexpression of OsMYB48-1, a Novel MYB-Related Transcription Factor, Enhances Drought and Salinity Tolerance in Rice.
Luo C., Guo C., Wang W., Wang L., Chen L.
Plant Cell Rep. 2014  33(2)  323-36
Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice.
Du H., Chang Y., Huang F., Xiong L.
J Integr Plant Biol 2014   
gid1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice.
Teng K., Li J., Liu L., Han Y., Du Y., Zhang J., Sun H., Zhao Q.
Acta Physiologiae Plantarum 2014  36  2219-2227
Exogenous ABA induces drought tolerance in upland rice: The role of chloroplast and ABA biosynthesis-related gene expression on photosystem II during PEG stress
Liang C., Wang Y., Zhu Y., Tang J., Hu B., Liu L., Ou S., Wu H., Sun X., Chu J., Chu C.
Proc. Natl. Acad. Sci. U.S.A. 2014  111(27)  10013-8
OsNAP connects abscisic acid and leaf senescence by fine-tuning abscisic acid biosynthesis and directly targeting senescence-associated genes in rice.
Bang S.W., Park S.H., Jeong J.S., Kim Y.S., Jung H., Ha S.H., Kim J.K.
Planta 2013  237(1)  211-24
Characterization of the stress-inducible OsNCED3 promoter in different transgenic rice organs and over three homozygous generations.
Xu J., Audenaert K., Hofte M., De Vleesschauwer D.
PLoS ONE 2013  8(6)  e67413
Abscisic Acid Promotes Susceptibility to the Rice Leaf Blight Pathogen Xanthomonas oryzae pv oryzae by Suppressing Salicylic Acid-Mediated Defenses.
Fukumoto T., Kano A., Ohtani K., Inoue M., Yoshihara A., Izumori K., Tajima S., Shigematsu Y., Tanaka K., Ohkouchi T., Ishida Y., Nishizawa Y., Tada Y., Ichimura K., Gomi K., Yoo S.D., Sheen J., Akimitsu K.
Planta 2013  237(5)  1379-91
Phosphorylation of D-allose by hexokinase involved in regulation of OsABF1 expression for growth inhibition in Oryza sativa L.
Liu D., Chen X., Liu J., Ye J., Guo Z.
J. Exp. Bot. 2012  63  3899-3912
The rice ERF transcription factor OsERF922 negatively regulates resistance to Magnaporthe oryzae and salt tolerance.
Ji X. , Dong B. , Shiran B. , Talbot M.J. , Edlington J.E. , Hughes T. , White R.G. , Gubler F. , Dolferus R.
Plant Physiol. 2011  156(2)  647-62
Control of abscisic Acid catabolism and abscisic Acid homeostasis is important for reproductive stage stress tolerance in cereals.
Tao Z., Kou Y., Liu H., Li X., Xiao J., Wang S.
J. Exp. Bot. 2011  62(14)  4863-74
OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice.
Mahmoud W Yaish, Ashraf El-Kereamy, Zhu T., Perrin H Beatty, Allen G Good, Yong-Mei Bi, Steven J Rothstein
PLoS Genet. 2010  6(9)  e1001098
The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice.
Zhu G,Ye N,Zhang J
Plant Cell Physiol. 2009  50  644-51
Glucose-induced delay of seed germination in rice is mediated by the suppression of ABA catabolism rather than an enhancement of ABA biosynthesis.
Welsch,R., Wust,F., Bar,C., Al-Babili,S. and Beyer,P.
Plant Physiol. 2008  147(1)  367-380
A third phytoene synthase is devoted to abiotic stress-induced abscisic acid formation in rice and defines functional diversification of phytoene synthase genes
Oliver SN,Dennis ES,Dolferus R
Plant Cell Physiol. 2007  48  1319-30
ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice.
Saika,H., Okamoto,M., Miyoshi,K., Kushiro,T., Shinoda,S., Jikumaru,Y., Fujimoto,M., Arikawa,T., Takahashi,H., Ando,M., Arimura,S., Miyao,A., Hirochika,H., Kamiya,Y., Tsutsumi,N., Nambara,E. and Nakazono,M.
Plant Cell Physiol. 2007  48(2)  287-298
Ethylene Promotes Submergence-Induced Expression of OsABA8ox1, a Gene that Encodes ABA 8'-Hydroxylase in Rice.
Bao-Cai Tan, Leina M Joseph, Wen-Tao Deng, Liu L., Qin-Bao Li, Cline K., Donald R McCarty
Plant J. 2003  35(1)  44-56
Molecular characterization of the Arabidopsis 9-cis epoxycarotenoid dioxygenase gene family.
TextPresso Search Search textpresso for NCED3 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to heat( GO:0009408 )
seed germination( GO:0009845 )
response to hypoxia( GO:0001666 )
9-cis-epoxycarotenoid dioxygenase activity( GO:0045549 )
abscisic acid biosynthetic process( GO:0009688 )
response to abscisic acid stimulus( GO:0009737 )
defense response to bacterium( GO:0042742 )
response to salt stress( GO:0009651 )
Trait Ontology drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 )
abscisic acid content( TO:0002667 )
bacterial blight disease resistance( TO:0000175 )
abscisic acid sensitivity( TO:0000615 )
oxygen sensitivity( TO:0000015 )
heat tolerance( TO:0000259 )
Plant Ontology 0 seed germination stage( PO:0007057 )
seed imbibition stage( PO:0007022 )
Related Strains
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Phenotype images
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Last updated
Jan 13, 2021


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