|
Basic Information
|
|
CGSNL Gene Symbol
|
NCED2
|
|
Gene Symbol Synonym
|
OSNCED2, OsNCED2, OsNCED5, NCED5
|
|
CGSNL Gene Name
|
9-CIS-EPOXYCAROTENOID DIOXYGENASE 2
|
|
Gene Name Synonym
|
9-cis-epoxycarotenoid dioxygenase 2
|
|
Protein Name
|
9-CIS-EPOXYCAROTENOID DIOXYGENASE 2
|
|
Allele
|
|
|
Chromosome No.
|
12
|
|
Explanation
|
AL731885. AY838901. OsNCED5 in Welsch et al. 2008, Teng et al. 2014, Xiong et al. 2014, Du et al. 2015, Zhao et al. 2016, Hong et al. 2016, Zhang et al. 2018, Liu et al. 2018, Liu et al. 2019, Kim et al. 2019, Liang et al. 2019, Cao et al. 2020, Suriyasak et al. 2020, Yuan et al. 2021, Verma et al. 2019, Huang et al. 2021, Santosh et al. 2021, Yang et al. 2021, Wang et al. 2021, He et al. 2022. an ABA biosynthesis gene.
|
|
Trait Class
|
Biochemical character
Seed - Physiological traits - Dormancy
Tolerance and resistance - Stress tolerance
Character as QTL - Germination
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK107649
|
|
MSU ID
|
LOC_Os12g42280.1
|
|
RAP ID
|
Os12g0617400
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
Link to INSD Accession List
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Yang B., Chen M., Zhan C., Liu K., Cheng Y., Xie T., Zhu P., He Y., Zeng P., Tang H., Tsugama D., Chen S., Zhang H., Cheng J.
J. Exp. Bot. 2022
Identification of OsPK5 involved in rice glycolytic metabolism and GA/ABA balance for improving seed germination via GWAS.
|
|
He Y., Chen S., Liu K., Chen Y., Cheng Y., Zeng P., Zhu P., Xie T., Chen S., Zhang H., Cheng J.
Plant Biotechnol. J. 2022 20(7) 1346-1362
OsHIPL1, a hedgehog-interacting protein-like 1 protein, increases seed vigour in rice.
|
|
Huang S., Hu L., Zhang S., Zhang M., Jiang W., Wu T., Du X.
Int J Mol Sci 2021 22(16)
Rice OsWRKY50 Mediates ABA-Dependent Seed Germination and Seedling Growth, and ABA-Independent Salt Stress Tolerance.
|
|
Santosh Kumar VV., Yadav S.K., Verma R.K., Shrivastava S., Ghimire O., Pushkar S., Rao M.V., Senthil Kumar T., Chinnusamy V.
J. Exp. Bot. 2021 72(4) 1411-1431
The abscisic acid receptor OsPYL6 confers drought tolerance to indica rice through dehydration avoidance and tolerance mechanisms.
|
|
Yuan Z., Fan K., Wang Y., Tian L., Zhang C., Sun W., He H., Yu S.
Plant Physiol. 2021
OsGRETCHENHAGEN3-2 modulates rice seed storability via accumulation of abscisic acid and protective substances.
|
|
Wang X., Ren P., Ji L., Zhu B., Xie G.
Planta 2021 255(1) 6
OsVDE, a xanthophyll cycle key enzyme, mediates abscisic acid biosynthesis and negatively regulates salinity tolerance in rice.
|
|
Suriyasak C., Oyama Y., Ishida T., Mashiguchi K., Yamaguchi S., Hamaoka N., Iwaya-Inoue M., Ishibashi Y.
Sci Rep 2020 10(1) 17378
Mechanism of delayed seed germination caused by high temperature during grain filling in rice (Oryza sativa L.).
|
|
Cao X., Wu L., Wu M., Zhu C., Jin Q., Zhang J.
BMC Plant Biol. 2020 20(1) 198
Abscisic acid mediated proline biosynthesis and antioxidant ability in roots of two different rice genotypes under hypoxic stress.
|
|
Liu C., Schläppi MR., Mao B., Wang W., Wang A., Chu C.
Plant Biotechnol. J. 2019
The bZIP73 transcription factor controls rice cold tolerance at the reproductive stage.
|
|
Verma R.K., Santosh Kumar VV., Yadav S.K., Pushkar S., Rao M.V., Chinnusamy V.
Front Plant Sci 2019 10 1488
Overexpression of ABA Receptor <i>PYL10</i> Gene Confers Drought and Cold Tolerance to Indica Rice.
|
|
Kim T., Kang K., Kim S.H., An G., Paek N.C.
Int J Mol Sci 2019 20(18)
OsWRKY5 Promotes Rice leaf senescence via Senescence-Associated NAC and Abscisic Acid Biosynthesis Pathway.
|
|
Liang S., Xiong W., Yin C., Xie X., Jin Y.J., Zhang S., Yang B., Ye G., Chen S., Luan W.J.
Front Plant Sci 2019 10 1088
Overexpression of <i>OsARD1</i> Improves Submergence, Drought, and Salt Tolerances of Seedling Through the Enhancement of Ethylene Synthesis in Rice.
|
|
Liu C., Ou S., Mao B., Tang J., Wang W., Wang H., Cao S., Schläppi MR., Zhao B., Xiao G., Wang X., Chu C.
Nat Commun 2018 9(1) 3302
Early selection of bZIP73 facilitated adaptation of japonica rice to cold climates.
|
|
Zhang D., Wang Y., Shen J., Yin J., Li D., Gao Y., Xu W., Liang J.
Rice (N Y) 2018 11(1) 45
OsRACK1A, encodes a circadian clock-regulated WD40 protein, negatively affect salt tolerance in rice.
|
|
Zhao J., Li M., Gu D., Liu X., Zhang J., Wu K., Zhang X., Teixeira da Silva JA., Duan J.
Biochem. Biophys. Res. Commun. 2016 470(2) 439-44
Involvement of rice histone deacetylase HDA705 in seed germination and in response to ABA and abiotic stresses.
|
|
Hong Y., Zhang H., Huang L., Li D., Song F.
Front Plant Sci 2016 7 4
Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and salt tolerance in Rice.
|
|
Du H., Chang Y., Huang F., Xiong L.
J Integr Plant Biol 2014
gid1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice.
|
|
Teng K., Li J., Liu L., Han Y., Du Y., Zhang J., Sun H., Zhao Q.
Acta Physiologiae Plantarum 2014 36 2219-2227
Exogenous ABA induces drought tolerance in upland rice: The role of chloroplast and ABA biosynthesis-related gene expression on photosystem II during PEG stress
|
|
Xiong H., Li J., Liu P., Duan J., Zhao Y., Guo X., Li Y., Zhang H., Ali J., Li Z.
PLoS ONE 2014 9(3) e92913
Overexpression of OsMYB48-1, a Novel MYB-Related Transcription Factor, Enhances Drought and Salinity Tolerance in Rice.
|
|
Fukumoto T., Kano A., Ohtani K., Inoue M., Yoshihara A., Izumori K., Tajima S., Shigematsu Y., Tanaka K., Ohkouchi T., Ishida Y., Nishizawa Y., Tada Y., Ichimura K., Gomi K., Yoo S.D., Sheen J., Akimitsu K.
Planta 2013 237(5) 1379-91
Phosphorylation of D-allose by hexokinase involved in regulation of OsABF1 expression for growth inhibition in Oryza sativa L.
|
|
Ji X. , Dong B. , Shiran B. , Talbot M.J. , Edlington J.E. , Hughes T. , White R.G. , Gubler F. , Dolferus R.
Plant Physiol. 2011 156(2) 647-62
Control of abscisic Acid catabolism and abscisic Acid homeostasis is important for reproductive stage stress tolerance in cereals.
|
|
Zhu G,Ye N,Zhang J
Plant Cell Physiol. 2009 50 644-51
Glucose-induced delay of seed germination in rice is mediated by the suppression of ABA catabolism rather than an enhancement of ABA biosynthesis.
|
|
Welsch,R., Wust,F., Bar,C., Al-Babili,S. and Beyer,P.
Plant Physiol. 2008 147(1) 367-380
A third phytoene synthase is devoted to abiotic stress-induced abscisic acid formation in rice and defines functional diversification of phytoene synthase genes
|
|
Saika,H., Okamoto,M., Miyoshi,K., Kushiro,T., Shinoda,S., Jikumaru,Y., Fujimoto,M., Arikawa,T., Takahashi,H., Ando,M., Arimura,S., Miyao,A., Hirochika,H., Kamiya,Y., Tsutsumi,N., Nambara,E. and Nakazono,M.
Plant Cell Physiol. 2007 48(2) 287-298
Ethylene Promotes Submergence-Induced Expression of OsABA8ox1, a Gene that Encodes ABA 8'-Hydroxylase in Rice.
|
|
Oliver SN,Dennis ES,Dolferus R
Plant Cell Physiol. 2007 48 1319-30
ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice.
|
|
Bao-Cai Tan, Leina M Joseph, Wen-Tao Deng, Liu L., Qin-Bao Li, Cline K., Donald R McCarty
Plant J. 2003 35(1) 44-56
Molecular characterization of the Arabidopsis 9-cis epoxycarotenoid dioxygenase gene family.
|
|
TextPresso Search
|
Search textpresso for NCED2
( Recent references may be retrievable, but without any warranty )
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
abscisic acid biosynthetic process( GO:0009688 )
9-cis-epoxycarotenoid dioxygenase activity( GO:0045549 )
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen( GO:0016702 )
seed germination( GO:0009845 )
response to cold( GO:0009409 )
response to hypoxia( GO:0001666 )
|
|
Trait Ontology
|
cold tolerance( TO:0000303 )
abscisic acid content( TO:0002667 )
drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 )
oxygen sensitivity( TO:0000015 )
|
|
Plant Ontology
|
0 seed germination stage( PO:0007057 )
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Aug 24, 2022
|
Update info.
Click here for feedback