Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CAX1A
Gene Symbol Synonym OsCAX1a, CAX1a, CAX1, OsCAX1, OsNCX2, OsNCX2.1, OsNCX2.2, NCX2, OsVCAX1a
CGSNL Gene Name Ca(2+)/H(+) EXCHANGER 1A
Gene Name Synonym Vacuolar cation/proton exchanger 1a, Ca(2+)/H(+) exchanger 1a, cation/H+ exchanger 1a, cation/proton exchanger 1a, cation/H exchanger 1a, Na+/Ca2+ Exchanger 2, Sodium/Calcium exchanger 2
Protein Name Ca(2+)/H(+) EXCHANGER 1A
Chromosome No. 1
Explanation AB112656. Q769E5. Oryza barthii: ObarCAX1a: OBART01G19480, Oryza brachyantha: ObraCAX1a: OB01G29140, Oryza glaberrima: OglaCAX1a: ORGLA01G0159500, Oryza glumipatula: OgluCAX1a: OGLUM01G23110, Oryza longistaminata: OlCAX1a: OLONG_003101, Oryza meridionalis: OmCAX1a: OMERI03G17940, Oryza nivara: OnCAX1a: ONIVA01G22100, Oryza punctata: OpCAX1a: OPUNC01G19850, Oryza rufipogon: OrCAX1a: ORUFI01G21940. TO:0006059: cadmium content trait.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK100765
MSU ID LOC_Os01g37690.1
RAP ID Os01g0557500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Luo X., Wang L., Fu Y., Liu Q., Chen G., Liu Y., He W., Gao A., Xu J., Deng H., Xing J.
Front Plant Sci 2022  13  934195
FERONIA-like receptor 1-mediated calcium ion homeostasis is involved in the immune response.
Zou W., Chen J., Meng L., Chen D., He H., Ye G.
Int J Mol Sci 2021  22(15) 
The Rice Cation/H+ Exchanger Family Involved in Cd Tolerance and Transport.
Shanmugam S., Boyett V.A., Khodakovskaya M.
PLoS ONE 2021  16(10)  e0258171
Enhancement of drought tolerance in rice by silencing of the OsSYT-5 gene.
Gong X., Zhang Z., Yue J., Tang W., Tang X., Zeng Z., Niu X., Chen D., Sang X., Xiao F., He G., Liu Y.
Crop Sci. 2018  58  486-506
Phenotypic Characterization, Fine Mapping, and Altered Expression Profiling of roses1 Mutation That Affects Organ Size and Water Loss Through Regulating Stomatal Density in Rice
Pittman J.K., Hirschi K.D.
Rice (N Y) 2016  9(1)  3
Phylogenetic analysis and protein structure modelling identifies distinct Ca(2+)/Cation antiporters and conservation of gene family structure within Arabidopsis and rice species.
Jeong K., Baten A., Waters D.L., Pantoja O., Julia C.C., Wissuwa M., Heuer S., Kretzschmar T., Rose T.J.
Plant Biotechnol. J. 2016   
Phosphorus remobilization from rice flag leaves during grain filling: an RNA-seq study.
Singh U.M., Metwal M., Singh M., Taj G., Kumar A.
Gene 2015  566(1)  37-46
Identification and characterization of calcium transporter gene family in finger millet in relation to grain calcium content.
Singh A.K., Kumar R., Tripathi A.K., Gupta B.K., Pareek A., Singla-Pareek SL.
Rice (N Y) 2015  8(1)  54
Genome-wide investigation and expression analysis of Sodium/Calcium exchanger gene family in rice and Arabidopsis.
Singh A., Kanwar P., Yadav A.K., Mishra M., Jha S.K., Baranwal V., Pandey A., Kapoor S., Tyagi A.K., Pandey G.K.
FEBS J. 2014  281(3)  894-915
Genome-wide expressional and functional analysis of calcium transport elements during abiotic stress and development in rice.
Kamiya T, Akahori T, Ashikari M, Maeshima M.
Plant Cell Physiol. 2006  47(1)  96-106
Expression of the vacuolar Ca2+/H+ exchanger, OsCAX1a, in rice: cell and age specificity of expression, and enhancement by Ca2+.
Kamiya T., Akahori T., Maeshima M.
Plant & cell physiology 2005  46(10)  1735-40
Expression profile of the genes for rice cation/H+ exchanger family and functional analysis in yeast.
Kamiya,T. and Maeshima,M.
J. Biol. Chem. 2004  279(1)  812-819
Residues in internal repeats of the rice cation/h+ exchanger are involved in the transport and selection of cations.
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DB Reference
Gramene ID -
Gene Ontology membrane( GO:0016020 )
cadmium ion transport( GO:0015691 )
cadmium ion homeostasis( GO:0055073 )
response to cadmium ion( GO:0046686 )
vacuolar membrane( GO:0005774 )
calcium ion binding( GO:0005509 )
vacuole( GO:0005773 )
calcium ion transport( GO:0006816 )
cation transmembrane transporter activity( GO:0008324 )
antiporter activity( GO:0015297 )
integral to membrane( GO:0016021 )
transmembrane transport( GO:0055085 )
response to UV( GO:0009411 )
response to calcium ion( GO:0051592 )
cellular response to phosphate starvation( GO:0016036 )
Trait Ontology salt tolerance( TO:0006001 )
drought tolerance( TO:0000276 )
cold tolerance( TO:0000303 )
UV light sensitivity( TO:0000160 )
phosphorus sensitivity( TO:0000102 )
Plant Ontology leaf( PO:0025034 )
inflorescence( PO:0009049 )
root( PO:0009005 )
spikelet( PO:0009051 )
Related Strains
Phenotype images
Last updated
Jul 19, 2023