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Basic Information
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CGSNL Gene Symbol
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ROMT9
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Gene Symbol Synonym
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COMT, OsCOMT, ROMT-9, OsCOMT1, OsCAldOMT1, CAldOMT1, OsOMT, OsCOMT15, COMT15
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CGSNL Gene Name
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O-METHYLTRANSFERASE 9
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Gene Name Synonym
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Quercetin 3-O-methyltransferase 1, Flavonol 3-O-methyltransferase 1, caffeic acid 3-O-methyltransferase, Flavonol 3-O-methyltransferase 1, caffeic acid O-methyltransferase 1, 5-hydroxyconiferaldehyde O-methyltransferase 1, 5-hydroxyconiferaldehyde OMT1, 5-HCAld OMT1, Caffeic Acid O-Methyltransferase 15
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Protein Name
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O-METHYLTRANSFERASE 9
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Allele
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oscomt1
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Chromosome No.
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8
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Explanation
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EC=2.1.1.76 Q6ZD89. DQ288259. AB122056, XM_480185. ROMT9 is a major OMT required for biosynthesis (Lam et al. 2015). SCC (sulfur-containing compound) biosynthetic gene. OsCOMT15 in Liang et al. 2022. GO:1901698: response to nitrogen compound. GO:1900056: negative regulation of leaf senescence. TO:0020109: vascular bundle development trait. GO:1903647: negative regulation of chlorophyll catabolic process. GO:1904821: chloroplast disassembly. PO:0030123: panicle inflorescence. TO:0000975: grain width. TO:0020083: stem diameter.
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Trait Class
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Biochemical character
Vegetative organ - Leaf
Vegetative organ - Culm
Reproductive organ - panicle
Coloration - Chlorophyll
Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK061859
AK064768
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MSU ID
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LOC_Os08g06100.1
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RAP ID
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Os08g0157500
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
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Build5
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RAP-DB
(
IRGSP 1.0
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Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Huangfu L., Chen R., Lu Y., Zhang E., Miao J., Zuo Z., Zhao Y., Zhu M., Zhang Z., Li P., Xu Y., Yao Y., Liang G., Xu C., Zhou Y., Yang Z.
Plant Biotechnol. J. 2022
OsCOMT, encoding a caffeic acid O-methyltransferase in melatonin biosynthesis, increases rice grain yield through dual regulation of leaf senescence and vascular development.
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Abdullah-Zawawi MR., Govender N., Muhammad N.A.N., Mohd-Assaad N., Zainal Z., Mohamed-Hussein ZA.
Sci Rep 2022 12(1) 13829
Genome-wide analysis of sulfur-encoding biosynthetic genes in rice (Oryza sativa L.) with Arabidopsis as the sulfur-dependent model plant.
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Liang S., Xu S., Qu D., Yang L., Wang J., Liu H., Xin W., Zou D., Zheng H.
Int J Mol Sci 2022 23(15)
Identification and Functional Analysis of the Caffeic acid O-methyltransferase (COMT) Gene Family in Rice (<i>Oryza sativa</i> L.).
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Hwang O.J., Back K.
Antioxidants (Basel) 2022 11(5)
Molecular Regulation of Antioxidant Melatonin Biosynthesis by Brassinosteroid Acting as an Endogenous Elicitor of Melatonin Induction in Rice Seedlings.
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Sun X., Ma Y., Yang C., Li J.
Plant Mol. Biol. 2020 104(3) 249-261
Rice OVATE family protein 6 regulates leaf angle by modulating secondary cell wall biosynthesis.
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Dong N.Q., Sun Y., Guo T., Shi C.L., Zhang Y.M., Kan Y., Xiang Y.H., Zhang H., Yang Y.B., Li Y.C., Zhao H.Y., Yu H.X., Lu Z.Q., Wang Y., Ye W.W., Shan J.X., Lin H.X.
Nat Commun 2020 11(1) 2629
UDP-glucosyltransferase regulates grain size and abiotic stress tolerance associated with metabolic flux redirection in rice.
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Sánchez-Sanuy F., Peris-Peris C., Tomiyama S., Okada K., Hsing Y.I., San Segundo B., Campo S.
BMC Plant Biol. 2019 19(1) 563
Osa-miR7695 enhances transcriptional priming in defense responses against the rice blast fungus.
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Zhao K., Lin F., Romero-Gamboa SP., Saha P., Goh H.J., An G., Jung K.H., Hazen S.P., Bartley L.E.
Front Plant Sci 2019 10 1275
Rice Genome-Scale Network Integration Reveals Transcriptional Regulators of Grass Cell Wall Synthesis.
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Lam P.Y., Tobimatsu Y., Matsumoto N., Suzuki S., Lan W., Takeda Y., Yamamura M., Sakamoto M., Ralph J., Lo C., Umezawa T.
Sci Rep 2019 9(1) 11597
OsCAldOMT1 is a bifunctional O-methyltransferase involved in the biosynthesis of tricin-lignins in rice cell walls.
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Miyamoto T., Takada R., Tobimatsu Y., Takeda Y., Suzuki S., Yamamura M., Osakabe K., Osakabe Y., Sakamoto M., Umezawa T.
Plant J. 2019 98(6) 975-987
OsMYB108 loss-of-function enriches p-coumaroylated and tricin lignin units in rice cell walls.
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Kishi-Kaboshi M., Seo S., Takahashi A., Hirochika H.
Plant Cell Physiol. 2018 59(5) 903-915
The MAMP-Responsive MYB Transcription Factors MYB30, MYB55 and MYB110 Activate the HCAA Synthesis Pathway and Enhance Immunity in Rice.
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Wu L., Zhang W., Ding Y., Zhang J., Cambula E.D., Weng F., Liu Z., Ding C., Tang S., Chen L., Wang S., Li G.
Front Plant Sci 2017 8 881
Shading Contributes to the Reduction of Stem Mechanical Strength by Decreasing Cell Wall Synthesis in Japonica Rice (Oryza sativa L.).
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Zhang W., Wu L., Ding Y., Yao X., Wu X., Weng F., Li G., Liu Z., Tang S., Ding C., Wang S.
J. Plant Res. 2017
Nitrogen fertilizer application affects lodging resistance by altering secondary cell wall synthesis in japonica rice (Oryza sativa).
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Lam P.Y., Liu H., Lo C.
Plant Physiol. 2015 168(4) 1527-36
Completion of Tricin Biosynthesis Pathway in Rice: Cytochrome P450 75B4 Is a Unique Chrysoeriol 5'-Hydroxylase.
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Byeon Y., Choi G.H., Lee H.Y., Back K.
J. Exp. Bot. 2015
Melatonin biosynthesis requires N-acetylserotonin methyltransferase activity of caffeic acid O-methyltransferase in rice.
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Noda S., Koshiba T., Hattori T., Yamaguchi M., Suzuki S., Umezawa T.
Planta 2015 242(3) 589-600
The expression of a rice secondary wall-specific cellulose synthase gene, OsCesA7, is directly regulated by a rice transcription factor, OsMYB58/63.
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Ogo Y., Ozawa K., Ishimaru T., Murayama T., Takaiwa F.
Plant Biotechnol. J. 2013 11(6) 734-46
Transgenic rice seed synthesizing diverse flavonoids at high levels: a new platform for flavonoid production with associated health benefits.
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Koshiba T.a, Hirose N.a, Mukai M.a, Yamamura M.a, Hattori T.a d, Suzuki S.a, Sakamoto M.b, Umezawa T.a c
Plant Biotechnology 2013 30 157-167
Characterization of 5-hydroxyconiferaldehyde O-methyltransferase in Oryza sativa
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Park H.L., Lee S.W., Jung K.H., Hahn T.R., Cho M.H.
Phytochemistry 2013 96 57-71
Transcriptomic analysis of UV-treated rice leaves reveals UV-induced phytoalexin biosynthetic pathways and their regulatory networks in rice.
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Shimizu T., Lin F., Hasegawa M., Okada K., Nojiri H., Yamane H.
J. Biol. Chem. 2012 287(23) 19315-25
Purification and identification of naringenin 7-O-methyltransferase, a key enzyme in the biosynthesis of the flavonoid phytoalexin sakuranetin in rice.
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Hirano K., Aya K., Kondo M., Okuno A., Morinaka Y., Matsuoka M.
Plant Cell Rep. 2012 31(1) 91-101
OsCAD2 is the major CAD gene responsible for monolignol biosynthesis in rice culm.
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Lin YZ,Chen HY,Kao R,Chang SP,Chang SJ,Lai EM
Phytochemistry 2008 69 715-28
Proteomic analysis of rice defense response induced by probenazole.
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Kim,B.G., Lee,Y., Hur,H.G., Lim,Y. and Ahn,J.H.
Phytochemistry 2006 67(4) 387-394
Flavonoid 3'-O-methyltransferase from rice: cDNA cloning, characterization and functional expression.
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TextPresso Search
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Search textpresso for ROMT9
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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sulfur compound biosynthetic process( GO:0044272 )
response to salt stress( GO:0009651 )
chloroplast( GO:0009507 )
response to brassinosteroid stimulus( GO:0009741 )
negative regulation of cell death( GO:0060548 )
cytokinin mediated signaling( GO:0009736 )
chloroplast organization( GO:0009658 )
chlorophyll catabolic process( GO:0015996 )
leaf senescence( GO:0010150 )
O-methyltransferase activity( GO:0008171 )
quercetin 3-O-methyltransferase activity( GO:0030755 )
protein dimerization activity( GO:0046983 )
lignan biosynthetic process( GO:0009807 )
cytoplasm( GO:0005737 )
acetylserotonin O-methyltransferase activity( GO:0017096 )
melatonin biosynthetic process( GO:0030187 )
secondary cell wall biogenesis( GO:0009834 )
phenylpropanoid metabolic process( GO:0009698 )
response to UV( GO:0009411 )
lignin biosynthetic process( GO:0009809 )
response to light intensity( GO:0009642 )
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Trait Ontology
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hydrogen peroxide content( TO:0000605 )
chlorophyll-b content( TO:0000295 )
chlorophyll-a content( TO:0000293 )
chlorophyll content( TO:0000495 )
cytokinin content( TO:0002660 )
stem thickness( TO:0000339 )
small vascular bundle number( TO:0000558 )
large vascular bundle number( TO:0000539 )
grain number( TO:0002759 )
filled grain number( TO:0000447 )
panicle number( TO:0000152 )
1000-seed weight( TO:0000382 )
grain thickness( TO:0000399 )
grain length( TO:0000734 )
flag leaf lamina width( TO:0002758 )
salt tolerance( TO:0006001 )
vascular bundle number( TO:0000472 )
grain yield per plant( TO:0000449 )
plant height( TO:0000207 )
panicle length( TO:0000040 )
leaf width( TO:0000370 )
brassinosteroid sensitivity( TO:0002677 )
vascular tissue related trait( TO:0000470 )
grain yield( TO:0000396 )
leaf senescence( TO:0000249 )
photosynthetic ability( TO:0000316 )
light intensity sensitivity( TO:0000460 )
nitrogen sensitivity( TO:0000011 )
stem strength( TO:0000051 )
UV light sensitivity( TO:0000160 )
lignin content( TO:0000731 )
lignin biosynthesis trait( TO:0000733 )
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Plant Ontology
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4 leaf senescence stage( PO:0001054 )
root( PO:0009005 )
stem( PO:0009047 )
leaf( PO:0025034 )
leaf sheath( PO:0020104 )
inflorescence( PO:0009049 )
stem node( PO:0020141 )
leaf lamina vascular system( PO:0000048 )
shoot axis vascular system( PO:0000039 )
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Related Strains
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Phenotype images
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Last updated
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Dec 15, 2022
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