Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PI40
Gene Symbol Synonym Pi40(t), Pi40, pi40, Pi-40(t), Pi-40
Gene Name Synonym Pyricularia grisea resistance 40, Magnaporthe grisea resistance 40, Blast resistance 40
Protein Name
Chromosome No. 6
Explanation Original line is IR65482-4-136-2-2 (O. australiensis). Map position (54.1-61.6 cM). Pi40(t) is one of the NBS-LRR genes in the Pi2/Pi9 cluster on chromosome 6 (Zhu et al. 2012).
Trait Class Tolerance and resistance - Disease resistance
Character as QTL - Grain quality
cDNA Accession No. -
Links -
INSD Accession List
(Test version)
Link map Classical linkage map
Miah G., Rafii M.Y., R .Ismail M., B. Puteh A., A. Rahim H., Asfaliza R., A. Latif M.
Mol. Biol. Rep. 2013  40(3)  2369-88
Blast resistance in rice: a review of conventional breeding to molecular approaches
Mahender A., Swain D.M., Gitishree D., Subudhi H.N., Rao G.J.N.
Afr. J. Biotechnol. 2012  11  1321-1329
Molecular analysis of native Manipur rice accessions for resistance against blast
Zhu X., Chen S., Yang J., Zhou S., Zeng L., Han J., Su J., Wang L., Pan Q.
Theor. Appl. Genet. 2012  124(7)  1295-304
The identification of Pi50(t), a new member of the rice blast resistance Pi2/Pi9 multigene family.
Sharma T.R., Rai A.K., Gupta S.K., Vijayan J., Devanna B.N., Ray S.
Agric Res 2012  1  37-52
Rice Blast Management Through Host-Plant Resistance: Retrospect and Prospects
Xiao W., Yang Q., Wang H., Duan J., Guo T., Liu Y., Zhu X., Chen Z.
Mol Breeding (Published online) 2011  28  303-312
Identification and fine mapping of a major R gene to Magnaporthe oryzae in a broad-spectrum resistant germplasm in rice
Zhou B., Wang G.L.
Advances in Genetics, Genomics and Control of Rice Blast 2009    127-135
Functional and Evolutionary Analysis of the Pi2/9 Locus in Rice
Koide Y., Kobayashi N., Xu D., Fukuta Y.
JARQ 2009  43  255-280
Resistance Genes and Selection DNA Markers for Blast Disease in Rice (Oryza sativa L.)
Suh JP,Roh JH,Cho YC,Han SS,Kim YG,Jena KK
Phytopathology 2009  99  243-50
The pi40 gene for durable resistance to rice blast and molecular analysis of pi40-advanced backcross breeding lines.
Jena K.K., Suh J.P., Jeung J.U., Cho Y.C., Roh J.H., Han S.S., Kim Y.G., Brar D.S.
5th International Crop Science Congress proceedings 2008    1-4
Molecular Breeding for Durable Blast Disease Resistance in Rice
Jena K.K., Jeung J.U., Kim B.R., Han S.S., Suh J.P., Cho Y.C., Roh J.H., Kim Y.G., Brar D.S.
In: Abstr. Plant & Animal Genomes XVI Conference 2008    -
A New Gene, Pi40 Confers Broad-Spectrum Blast Disease Resistance And Useful In Marker-Assisted Selection (MAS) For Blast Resistance In Rice
Jeung JU,Kim BR,Cho YC,Han SS,Moon HP,Lee YT,Jena KK
Theor. Appl. Genet. 2007  115  1163-77
A novel gene, Pi40(t), linked to the DNA markers derived from NBS-LRR motifs confers broad spectrum of blast resistance in rice.
TextPresso Search Search textpresso for PI40 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology response to fungus( GO:0009620 )
Trait Ontology penetrated to total root ratio( TO:0000510 )
panicle blast disease resistance( TO:0000477 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Sep 26, 2013