Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PI9
Gene Symbol Synonym Pi9(t), Pi9(t)*, Pi9, Pi-9(t)
Gene Name Synonym Pyricularia oryzae resistance 9, Magnaporthe grisea resistance-9, Blast resistance 9
Chromosome No. 6
Explanation PO:0009025; leaf. GRO:0007049; 03-tillering stage ; GRO:0007047; 02-seedling. DQ285630, Original line is O. minuta 75-1-127.
Trait Class Tolerance and resistance - Disease resistance
cDNA Accession No. AK120452
MSU ID LOC_Os06g05359.1
RAP ID Os06g0146100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Locate(cM) 58.7
Link map Classical linkage map
Kapoor R., Kumar G., Arya P., Jaswal R., Jain P., Singh K., Sharma T.R.
Plants (Basel) 2019  8(9) 
Genome-Wide Analysis and Expression Profiling of Rice Hybrid Proline-Rich Proteins in Response to Biotic and Abiotic Stresses, and Hormone Treatment.
Zhai K., Deng Y., Liang D., Tang J., Liu J., Yan B., Yin X., Lin H., Chen F., Yang D., Xie Z., Liu J.Y., Li Q., Zhang L., He Z.
Mol. Cell 2019  74(5)  996-1009.e7
RRM Transcription Factors Interact with NLRs and Regulate Broad-Spectrum Blast Resistance in Rice.
Yadav M.K., S A., Ngangkham U., Shubudhi H.N., Bag M.K., Adak T., Munda S., Samantaray S., Jena M.
PLoS ONE 2017  12(4)  e0176236
Use of molecular markers in identification and characterization of resistance to rice blast in India.
Imam J.a b, Alam S.a, Mandal N.P.a, Variar M.a, Shukla P.b
Euphytica 2014  196  199-211
Molecular screening for identification of blast resistance genes in North East and Eastern Indian rice germplasm (Oryza sativa L.) with PCR based makers
Miah G., Rafii M.Y., R .Ismail M., B. Puteh A., A. Rahim H., Asfaliza R., A. Latif M.
Mol. Biol. Rep. 2013  40(3)  2369-88
Blast resistance in rice: a review of conventional breeding to molecular approaches
Luo,S., Zhang,Y., Hu,Q., Chen,J., Li,K., Lu,C., Liu,H., Wang,W. and Kuang,H.
Plant Physiol. 2012  159(1)  197-210
Dynamic Nucleotide-Binding-Site and Leucine-Rich-Repeat- encoding Genes in the Grass Family
Mithrasena Y.J.P.K., Wijesundera W.S.S., Wijesundera R.L.C., Wimalasiri D.C., Priyanthi R.P.N.
Rice Science 2012  19  241-246
Pathogenic and Genetic Diversity of Magneporthe oryzae Populations from Sri Lanka
Sharma T.R., Rai A.K., Gupta S.K., Vijayan J., Devanna B.N., Ray S.
Agric Res 2012  1  37-52
Rice Blast Management Through Host-Plant Resistance: Retrospect and Prospects
Zhu X., Chen S., Yang J., Zhou S., Zeng L., Han J., Su J., Wang L., Pan Q.
Theor. Appl. Genet. 2012  124(7)  1295-304
The identification of Pi50(t), a new member of the rice blast resistance Pi2/Pi9 multigene family.
Wen S., Gao B.
Rice Genomics and Genetics 2011  2  31-36
Introgressing Blast Resistant Gene Pi-9(t) into Elite Rice Restorer Luhui17 by Marker-Assisted Selection
Xiao W., Yang Q., Wang H., Duan J., Guo T., Liu Y., Zhu X., Chen Z.
Mol Breeding (Published online) 2011  28  303-312
Identification and fine mapping of a major R gene to Magnaporthe oryzae in a broad-spectrum resistant germplasm in rice
Tacconi G., Baldassarre V., Lanzanova C., Faivre-Rampant O., Cavigiolo S., Urso S., Lupotto E., Vale G.
Molecular Breeding 2010  26(4)  595-617
Polymorphism analysis of genomic regions associated with broad-spectrum effective blast resistance genes for marker development in rice
Dai,L., Wu,J., Li,X., Wang,X., Liu,X., Jantasuriyarat,C., Kudrna,D., Yu,Y., Wing,R.A., Han,B., Zhou,B. and Wang,G.L.
Theor. Appl. Genet. 2010  121(2)  295-309
Genomic structure and evolution of the Pi2/9 locus in wild rice species
Koide Y., Kobayashi N., Xu D., Fukuta Y.
JARQ 2009  43  255-280
Resistance Genes and Selection DNA Markers for Blast Disease in Rice (Oryza sativa L.)
Suh JP,Roh JH,Cho YC,Han SS,Kim YG,Jena KK
Phytopathology 2009  99  243-50
The pi40 gene for durable resistance to rice blast and molecular analysis of pi40-advanced backcross breeding lines.
Zhou B., Wang G.L.
Advances in Genetics, Genomics and Control of Rice Blast 2009    127-135
Functional and Evolutionary Analysis of the Pi2/9 Locus in Rice
Ballini E., Morel J.B., Droc G., Price A., Courtois B., Notteghem J.L., Tharreau D.
Mol. Plant Microbe Interact. 2008  21(7)  859-68
A genome-wide meta-analysis of rice blast resistance genes and quantitative trait loci provides new insights into partial and complete resistance.
Lin,F., Chen,S., Que,Z., Wang,L., Liu,X. and Pan,Q.
Genetics 2007  177(3)  1871-1880
The Blast Resistance Gene Pi37 Encodes a Nucleotide Binding Site-Leucine-Rich Repeat Protein and Is a Member of a Resistance Gene Cluster on Rice Chromosome 1
Jeung JU,Kim BR,Cho YC,Han SS,Moon HP,Lee YT,Jena KK
Theor. Appl. Genet. 2007  115  1163-77
A novel gene, Pi40(t), linked to the DNA markers derived from NBS-LRR motifs confers broad spectrum of blast resistance in rice.
Zhou,B., Qu,S., Liu,G., Dolan,M., Sakai,H., Lu,G., Bellizzi,M. and Wang,G.L.
Mol. Plant Microbe Interact. 2006  19(11)  1216-1228
The eight amino-acid differences within three leucine-rich repeats between Pi2 and Piz-t resistance proteins determine the resistance specificity to Magnaporthe grisea.
Qu,S., Liu,G., Zhou,B., Bellizzi,M., Zeng,L., Dai,L., Han,B. and Wang,G.L.
Genetics 2006  172(3)  1901-1914
The broad-spectrum blast resistance gene pi9 encodes a nucleotide-binding site-leucine-rich repeat protein and is a member of a multigene family in rice.
Deng Y, Zhu X, Shen Y, He Z.
Theor. Appl. Genet. 2006  113(4)  705-13
Genetic characterization and fine mapping of the blast resistance locus Pigm(t) tightly linked to Pi2 and Pi9 in a broad-spectrum resistant Chinese variety.
Lu, G., C. Jantasuriyarat, B. Zhou, G.L. Wang
Theor. Appl. Genet. 2004  108  525-534
Isolation and characterization of novel defense response genes involved in compatible and incompatible interaction between rice and Magnaporthe grisea.
Sallaud, C., M. Lorieux, E. Roumen, D Tharreau, R. Berruyer, P. Svestasrani, O. Garsmeur, A. Ghesquiere, J.L. Nottenghem
Theor. Appl. Genet. 2003  106  794-803
Identification of five new blast resistance genes in the highly blast-resistant rice variety IR64 using a QTL mapping strategy.
Ramalingam J, Vera Cruz C, Kukreja K, Chittoorr JM, Wu JL, Lee SW, Baraoidan M, George ML, Cohen MB, Hulbert SH, Leach JE, Leung H.
Mol. Plant Microbe Interact. 2003  16(1)  14-24
Candidate defense genes from rice, barley, and maize and their association with qualitative and quantitative resistance in rice.
Muralidharan, K., D. Krishnaveni, G.S. Laha, C.S. Reddy, M. Srinivasprasad and R. Sridhar
RGN 2003  20  94-96
Evaluation of blast resistance genes in India.
Liu G, Lu G, Zeng L, Wang GL.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2002  267(4)  472-480
Two broad-spectrum blast resistance genes, Pi9( t) and Pi2( t), are physically linked on rice chromosome 6.
Brar, D.S. and Khush, G.S.
Plant Mol. Biol. 1997  35  35-47
Alien introgression in rice.
Causse, M.A., T.M. Fulton, Y.G. Cho, S.N. Ahn, J. Chunwongse, K. Wu, J. Xiao, Z. Yu, P.C. Ronald, S.E. Harrington, G. Second, S.R. McCouch and S.D. Tanksley
Genetics 1994  138  1251-1274.
Saturated molecular map of the rice genome based on an interspecific backcross population.
Amante-Bordeos A., Sitch L.A., Nelson R., Dalmacio R.D., Oliva N.P., Aswidinnoor H., Leung H.
Theor. Appl. Genet. 1992  84  345-354
Transfer of bacterial blight and blast resistance from the tetraploid wild rice Oryza minuta to cultivated rice, Oryza sativa
TextPresso Search Search textpresso for PI9 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060636
Gene Ontology response to fungus( GO:0009620 )
defense response( GO:0006952 )
ADP binding( GO:0043531 )
Trait Ontology leaf blast disease resistance( TO:0000468 )
panicle blast disease resistance( TO:0000477 )
nitrogen recycling( TO:0000506 )
Plant Ontology vascular leaf( PO:0009025 )
Related Strains
Phenotype images
Last updated
Mar 17, 2020