Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol LSI2
Gene Symbol Synonym Lsi2, SIET1, OsLsi2
CGSNL Gene Name LOW SILICON RICE 2
Gene Name Synonym low silicon 2, silicon efflux transporter 1, Si efflux transporter 1, Si/arsenite efflux transporter Lsi2
Protein Name SILICON EFFLUX TRANSPORTER 1
Allele lsi2
Chromosome No. 3
Explanation LOC_Os03g01700. AB222273. PO:0005772; exodermis ; PO:0009006; shoot ; PO:0000252; endodermis. GRO:0007045; 09-mature grain stage TO:0006054: arsenic concentration. ArsB/NhaD permease (arsenite efflux). TO:0001048: silicon content trait.
Trait Class Vegetative organ - Root
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK101092
RAP ID Os03g0107300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Wang F.Z., Chen M.X., Yu L.J., Xie L.J., Yuan L.B., Qi H., Xiao M., Guo W., Chen Z., Yi K., Zhang J., Qiu R., Shu W., Xiao S., Chen Q.F.
Front Plant Sci 2017  8  1868
OsARM1, an R2R3 MYB transcription factor, Is Involved in Regulation of the Response to Arsenic Stress in Rice.
Chen Y., Han Y.H., Cao Y., Zhu Y.G., Rathinasabapathi B., Ma L.Q.
Front Plant Sci 2017  8  268
Arsenic Transport in Rice and Biological Solutions to Reduce Arsenic Risk from Rice.
Yamaji N., Sakurai G., Mitani-Ueno N., Ma J.F.
Proc. Natl. Acad. Sci. U.S.A. 2015   
Orchestration of three transporters and distinct vascular structures in node for intervascular transfer of silicon in rice.
Ye M., Song Y., Long J., Wang R., Baerson S.R., Pan Z., Zhu-Salzman K., Xie J., Cai K., Luo S., Zeng R.
Proc. Natl. Acad. Sci. U.S.A. 2013  110(38)  E3631-9
Priming of jasmonate-mediated antiherbivore defense responses in rice by silicon.
Moore K.L. , Schr?der M. , Wu Z. , Martin B.G. , Hawes C.R. , McGrath S.P. , Hawkesford M.J. , Feng Ma J. , Zhao F.J. , Grovenor C.R.
Plant Physiol. 2011  156(2)  913-24
High-resolution secondary ion mass spectrometry reveals the contrasting subcellular distribution of arsenic and silicon in rice roots.
Zhang Y.X., Liu J.G., Chai T.Y., Jin L.
Progress in Biochemistry and Biophysics 2011  38  400-407
Advances in the uptake and translocation of silicon in plants
Li RY,Ago Y,Liu WJ,Mitani N,Feldmann J,McGrath SP,Ma JF,Zhao FJ
Plant Physiol. 2009  150(4)  2071-80
The rice aquaporin Lsi1 mediates uptake of methylated arsenic species.
Yamaji,N., Mitatni,N. and Ma,J.F.
Plant Cell 2008  20(5)  1381-1389
A transporter regulating silicon distribution in rice shoots
Ma JF,Yamaji N,Mitani N,Xu XY,Su YH,McGrath SP,Zhao FJ
Proc. Natl. Acad. Sci. U.S.A. 2008  105  9931-5
Transporters of arsenite in rice and their role in arsenic accumulation in rice grain.
Ma JF,Yamaji N,Tamai K,Mitani N
Plant Physiol. 2007  145  919-24
Genotypic difference in silicon uptake and expression of silicon transporter genes in rice.
Ma,J.F., Yamaji,N., Mitani,N., Tamai,K., Konishi,S., Fujiwara,T., Katsuhara,M. and Yano,M.
Nature 2007  448(7150)  209-212
An efflux transporter of silicon in rice
TextPresso Search Search textpresso for LSI2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0080037
Ontologies
Gene Ontology transport( GO:0006810 )
silicon efflux transmembrane transporter activity( GO:0032523 )
Casparian strip( GO:0048226 )
regulation of shoot development( GO:0048831 )
Trait Ontology grain yield( TO:0000396 )
silicon sensitivity( TO:0000031 )
Plant Ontology endodermis( PO:0000252 )
exodermis( PO:0005772 )
shoot system( PO:0009006 )
Related Strains
-
Phenotype images
-
Last updated
2018-03-03 11:45:55.902


Login ID
Password
/rice/oryzabase