Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol LFL1
Gene Symbol Synonym OsLFL1, OsSTA29, STA29
Gene Name Synonym B3 domain-containing protein LFL1, LEC2 and FUSCA3-like protein 1, LEAFY COTYLEDON 2 and FUSCA 3-LIKE 1, LEC2/FUS3-LIKE 1
Chromosome No. 1
Explanation PUTATIVE B3 TRANSCRIPTION FACTOR. A4LBC0. EF521182. a mature anther-preferentially expressed gene. GO:1990110: callus formation.
Trait Class Reproductive organ - Heading date
Reproductive organ - Spikelet, flower, glume, awn
cDNA Accession No. AK109920
MSU ID LOC_Os01g51610.1
RAP ID Os01g0713600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Guo F., Wang H., Lian G., Cai G., Liu W., Zhang H., Li D., Zhou C., Han N., Zhu M., Su Y., Seo P.J., Xu L., Bian H.
Commun Biol 2023  6(1)  457
Initiation of scutellum-derived callus is regulated by an embryo-like developmental pathway in rice.
Shim Y., Lim C., Seong G., Choi Y., Kang K., Paek N.C.
Plant Cell Environ. 2022  45(8)  2446-2459
The AP2/ERF transcription factor LATE FLOWERING SEMI-DWARF suppresses long-day-dependent repression of flowering.
Gong R., Cao H., Zhang J., Xie K., Wang D., Yu S.
Plant J. 2018  94(1)  32-47
Divergent functions of the GAGA-binding transcription factor family in rice.
Song S., Wang G., Hu Y., Liu H., Bai X., Qin R., Xing Y.
J. Exp. Bot. 2018  69(18)  4283-4293
OsMFT1 increases spikelets per panicle and delays heading date in rice by suppressing Ehd1, FZP and SEPALLATA-like genes.
Ling S., Chen C., Wang Y., Sun X., Lu Z., Ouyang Y., Yao J.
BMC Genomics 2015  16  101
The mature anther-preferentially expressed genes are associated with pollen fertility, pollen germination and anther dehiscence in rice.
Guo X., Hou X., Fang J., Wei P., Xu B., Chen M., Feng Y., Chu C.
Plant J. 2013  75(3)  403-16
The rice GERMINATION DEFECTIVE1, encoding a B3 domain transcriptional repressor, regulates seed germination and seedling development by integrating GA and carbohydrate metabolism.
Yang J., Lee S., Hang R., Kim S.R., Lee Y.S., Cao X., Amasino R., An G.
Plant J. 2013  73(4)  566-78
OsVIL2 functions with PRC2 to induce flowering by repressing OsLFL1 in rice.
Choong-Hwan Ryu, Lee S., Lae-Hyeon Cho, Song Lim Kim, Yang-Seok Lee, Sang Chul Choi, Hee Joong Jeong, Yi J., Soon Ju Park, Chang-Deok Han, An G.
Plant Cell Environ. 2009  32(10)  1412-27
OsMADS50 and OsMADS56 function antagonistically in regulating long day (LD)-dependent flowering in rice.
Peng,L.T., Shi,Z.Y., Li,L., Shen,G.Z. and Zhang,J.L.
J. Plant Physiol. 2008  165(8)  876-885
Overexpression of transcription factor OsLFL1 delays flowering time in Oryza sativa
Peng LT,Shi ZY,Li L,Shen GZ,Zhang JL
Biochem. Biophys. Res. Commun. 2007  360  251-6
Ectopic expression of OsLFL1 in rice represses Ehd1 by binding on its promoter.
TextPresso Search Search textpresso for LFL1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology negative regulation of long-day photoperiodism, flowering( GO:0048579 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
flower development( GO:0009908 )
promoter binding( GO:0010843 )
photoperiodism, flowering( GO:0048573 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
Trait Ontology flower development trait( TO:0000622 )
flowering time( TO:0002616 )
days to heading( TO:0000137 )
callus induction( TO:0000428 )
Plant Ontology anther( PO:0009066 )
flower development stage( PO:0007615 )
Related Strains
Phenotype images
Last updated
Aug 25, 2023